Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0028 |
Symbol | |
ID | 8017651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 33530 |
End bp | 34369 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644828812 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002980012 |
Protein GI | 241661652 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3449] DNA gyrase inhibitor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGCCC ACATCGACGC GCATCTGGAA GACGCGCTGG ACGTGGACGT GCTGGCCGAG GTGGCCGCGT TTTCCCGGTA CCACTTCCAC CGTCAGTTCT CGTTGCTGTT CGGCATGAAC GTCGGGCGCT ATCTGCAGTT GCTGCGCCTG AAGCGCGCTG CGCATCAACT CGCCTATCGC GACGATGTGC GCATCACCGA CATCGCACTG GCGTGCGGGT ACGAAGGGCC CGAGGCATTT GCGCGGGCGT TCCGCAGGCA GGCGGGCCAA TCGCCGTCAG CCTTCCGGGC GGCGCCGCAG TGGGCGTCCT GGGCGACCGA TCTACAGGCG CTGCGCGACC TCAGGAGCCA ACACATGCCC GCACAACCGC AAATCCAATC CGTTGAGATC GTCGAGCGCG AGGCCGTTGC CGTCGCCGCC ATCGAGCACC GCGGTGACCC AGCACGCCTG GGCGAGACCC TTCGCAGGTT CATCGCCTGG CGCCGCGAGC ATCGGCTGCA CCCGAGCGTT TCGGCCACGT ACAACGTCGT CTACGACAAT CCCGACGATG TGCCGCCCGA GGCGTTCCGC ATGGACATCT GCGCGGCCAC GTTCGCGCCG ATCGCCCCCA ATGCAGCGGG CGTAGCGGGC AAGACGCTGG CGGGCGGCCG CTACGCCGTG CTGCGTCACA CGGGCTCCGA CGACACGCTC GCCCAGAGCG TGGCGTACCT GTACGCCGAT TGGCTGCCGG CCAGCGGCGA GGAACTGCGC GACGCGCCGT TGCTGTTCCA GCGCGTGCGC TTCTACCCCG ACGTGCCCGA GCACGAAGCC GAGACTGACG TGCTCCTGCC GCTCAGGTGA
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Protein sequence | MLAHIDAHLE DALDVDVLAE VAAFSRYHFH RQFSLLFGMN VGRYLQLLRL KRAAHQLAYR DDVRITDIAL ACGYEGPEAF ARAFRRQAGQ SPSAFRAAPQ WASWATDLQA LRDLRSQHMP AQPQIQSVEI VEREAVAVAA IEHRGDPARL GETLRRFIAW RREHRLHPSV SATYNVVYDN PDDVPPEAFR MDICAATFAP IAPNAAGVAG KTLAGGRYAV LRHTGSDDTL AQSVAYLYAD WLPASGEELR DAPLLFQRVR FYPDVPEHEA ETDVLLPLR
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