Gene Rpic12D_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0028 
Symbol 
ID8017651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp33530 
End bp34369 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID644828812 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002980012 
Protein GI241661652 
COG category[L] Replication, recombination and repair 
COG ID[COG3449] DNA gyrase inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCC ACATCGACGC GCATCTGGAA GACGCGCTGG ACGTGGACGT GCTGGCCGAG 
GTGGCCGCGT TTTCCCGGTA CCACTTCCAC CGTCAGTTCT CGTTGCTGTT CGGCATGAAC
GTCGGGCGCT ATCTGCAGTT GCTGCGCCTG AAGCGCGCTG CGCATCAACT CGCCTATCGC
GACGATGTGC GCATCACCGA CATCGCACTG GCGTGCGGGT ACGAAGGGCC CGAGGCATTT
GCGCGGGCGT TCCGCAGGCA GGCGGGCCAA TCGCCGTCAG CCTTCCGGGC GGCGCCGCAG
TGGGCGTCCT GGGCGACCGA TCTACAGGCG CTGCGCGACC TCAGGAGCCA ACACATGCCC
GCACAACCGC AAATCCAATC CGTTGAGATC GTCGAGCGCG AGGCCGTTGC CGTCGCCGCC
ATCGAGCACC GCGGTGACCC AGCACGCCTG GGCGAGACCC TTCGCAGGTT CATCGCCTGG
CGCCGCGAGC ATCGGCTGCA CCCGAGCGTT TCGGCCACGT ACAACGTCGT CTACGACAAT
CCCGACGATG TGCCGCCCGA GGCGTTCCGC ATGGACATCT GCGCGGCCAC GTTCGCGCCG
ATCGCCCCCA ATGCAGCGGG CGTAGCGGGC AAGACGCTGG CGGGCGGCCG CTACGCCGTG
CTGCGTCACA CGGGCTCCGA CGACACGCTC GCCCAGAGCG TGGCGTACCT GTACGCCGAT
TGGCTGCCGG CCAGCGGCGA GGAACTGCGC GACGCGCCGT TGCTGTTCCA GCGCGTGCGC
TTCTACCCCG ACGTGCCCGA GCACGAAGCC GAGACTGACG TGCTCCTGCC GCTCAGGTGA
 
Protein sequence
MLAHIDAHLE DALDVDVLAE VAAFSRYHFH RQFSLLFGMN VGRYLQLLRL KRAAHQLAYR 
DDVRITDIAL ACGYEGPEAF ARAFRRQAGQ SPSAFRAAPQ WASWATDLQA LRDLRSQHMP
AQPQIQSVEI VEREAVAVAA IEHRGDPARL GETLRRFIAW RREHRLHPSV SATYNVVYDN
PDDVPPEAFR MDICAATFAP IAPNAAGVAG KTLAGGRYAV LRHTGSDDTL AQSVAYLYAD
WLPASGEELR DAPLLFQRVR FYPDVPEHEA ETDVLLPLR