| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0020 |
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| Symbol | |
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| ID | 8017643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 23072 |
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| End bp | 24637 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644828804 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_002980004 |
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| Protein GI | 241661644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC TTTTAATCGC CAAAGCGCAA GGCAGCAGCG CGCACACACA ACCCACACCG
GCACCGATTC CGCCCGACGC CCCGCGGCAC GCACGCGGCA TGCACGGCGC CGCGCTGGTG
ATGGCCGCCG CGCTGTCGCT GGGGCTGACT GCCTGCGGTG GCGGCGACGA TGCCGGCACC
ACCACCCCGC CGACGAACAA CAACACGCCA GCCCCCACCC CGTCACCCGC GCCCGCACCG
GCGCCCAAAC CGACGCCATC GCCATCCCCT GCGCCCACAC CAACGCCGGC GCCCACACCT
GCGCCAGCGC CGGCGACCTA TTCCGTGGGC GGTACCGTCA GCGGGCTGAC CAGCGGCAAG
TCCGTCACGC TGCTGGACAA CGGCGGCGAT GCGGTTGTCG TCAACGCCAA CGGCAGCTTC
AACTTCCCCA CCAAGCTCGC GCAGGGCAAG CCCTATGCAG CGACGGTCGG AACGCGGCCT
TCGGGTGAGA ACTGCACCGT CACCAACGGC AGCGGCACCG TGGGCACCAG CAACGTGACC
ACCATTGCGG TGGCCTGCAC GCCCAAGCCC CTGTTCGGCT ATGCGGTCAA CTCGAACGAC
GGCACCATCT CGGCCTTCAC GCTGGATGCG ACCACCGGCA TGCCTACCGC AGTCGGCACG
GCAGTGGCGG TGGGAGCAGG GCCGCTGTCG CTGACCATCG ACCCGGCGGG CAAGTTCGTC
TACGTGGCTA ACGCCAACGC CAACACCGTC ACCACGCTCT CCATCAATGC CGATACCGGC
CTGCTGACGG TCGTGGGATC AGCCACCCCA ACGGGTGTAC AGCCGTACAG CATTGCGCGC
ACGCCGAACG GCAAGTTTGC GTACACGGCC AACTATGGAG ACAACACGCT GTCGGCGTTC
TCCGTCAACG CGGGCACCGG TGCACTGACC GCGCTCGCGC CCATCACCGC CGGGGCCAAC
CCGTACACGG TCGCCATCAA CAGCGCAGGC ACCTTCGCCT ACGTGGTCAA CGCCAACAGC
GGCGCCACCC CGGGCACGGC CATGGCGTTT GCCGTCAACA ACACAACGGG CGCACTCACG
CAGGTGGGCA CCACGGTCAA CACGGGCAAC ACGCCGCAGT TCATCGCGGT CAACTCGGCG
GGCACCTACG CCTATGTGAC CAACGCCGCA GACAACACCA TCAGCGTCTA CAGCATCAGC
AACACCGGGG CGCTCACCGC ATCGGGCACA CCGGTGGCGG CAGGCACCAA CCCGTACTAC
ATCGCCATCG CACCGTCGGG CGGCTTCATG TACGTGACCA ACGTGCTGGC CAACACGGTC
AGCGTCTTCA GCATCAACCC GTCCAACGGC GCCCTGACAG CGGTCGCCAC CACACCCACC
GGCAACGCGC CCGTGACCGT GCTCGTCAAC CCCGCCGGCA CCTTCGCCTA TGTGGTCAGC
GCCGTGGACA ACAGCGTCAG CGCATACAGC ATCGACAGCA CCACCGGCAA GCTGACCGCC
GTGGCAAGCG GGTCAGCCGC CACCGGCAAC ATCCCGCGCG GGATGGCGAT TGTGGCGGTG
CCGTGA
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| Protein sequence | MAELLIAKAQ GSSAHTQPTP APIPPDAPRH ARGMHGAALV MAAALSLGLT ACGGGDDAGT
TTPPTNNNTP APTPSPAPAP APKPTPSPSP APTPTPAPTP APAPATYSVG GTVSGLTSGK
SVTLLDNGGD AVVVNANGSF NFPTKLAQGK PYAATVGTRP SGENCTVTNG SGTVGTSNVT
TIAVACTPKP LFGYAVNSND GTISAFTLDA TTGMPTAVGT AVAVGAGPLS LTIDPAGKFV
YVANANANTV TTLSINADTG LLTVVGSATP TGVQPYSIAR TPNGKFAYTA NYGDNTLSAF
SVNAGTGALT ALAPITAGAN PYTVAINSAG TFAYVVNANS GATPGTAMAF AVNNTTGALT
QVGTTVNTGN TPQFIAVNSA GTYAYVTNAA DNTISVYSIS NTGALTASGT PVAAGTNPYY
IAIAPSGGFM YVTNVLANTV SVFSINPSNG ALTAVATTPT GNAPVTVLVN PAGTFAYVVS
AVDNSVSAYS IDSTTGKLTA VASGSAATGN IPRGMAIVAV P
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