Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0016 |
Symbol | |
ID | 8017639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 18693 |
End bp | 19640 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828800 |
Product | protein of unknown function UPF0187 |
Protein accession | YP_002980000 |
Protein GI | 241661640 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.742789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGTCC GCCCCCATCT GCACTGGTTC CGCATGCTGC TCGCATGGCG CGGATCGGTG TTGCCGCAGC TTCTGCCGCG CCTGTTCCTG ATCTTCTTCG TGTCGTTGGT GGCCATCGCG GTGCATGCGC ACCTGCTGCC CGTCTCCGTC AACCTGAGCA CGACGCCGTT CTCGCTCGTC GGCATTGCGC TGGCGGTGTT CCTGGGCTTT CGCAACAACG CCAGCTACGA CCGCTACTGG GAGGCCCGCA AGCTCTGGGG CCAGTTGCTC AACACGGCGC GATCGCTCAC GCGCCAGGCG CTGACGCTGC CGCGCGGCGA TGGCCCGCAT GACACCAGCG GTCCCGCAGC CGATGCCGAC GTGCGCGAGT TCGCACAGGT GCTGGGCGCG CTGCCGCACG CGCTGCGCCA CCAGTTGCGC CACACCGATG CACGCGACGA CCTCGCCGCC CGCCTGCCCG TGCCGTTGCT CGAGCGCGTG ATGGCCTCGC GCTACCGGCC CATCGCCATC GTGCAGTGGC TGGGTGAATG GGTGCAGCGT CGCGCGCAAG CCGGTACCGT TGATGGGTAT GCCGCCCTGG CGTTCGACCG CAACCTCAAC GAGTTGTCGA ACAGCATCGG CGGGTGCGAG CGCATTGCGG GCACGCCGCT GCCGTTTGCT TACTCGGTCA TGATCCACCG CACGGTGTAC TTCTTCTGCG CGGCACTGCC GTTTGGGCTG GTGGAAAGCA TCGGCAGTTT CACGCCCGTG TTTGCGGTGT TCGTGGCGTA CACCTTCATG GCGCACGAGG CCATCGCCTC GCAGCTCGAA GACCCGTTCG GCACCGAAGA CAACGACCTC GCGCTCAACG CGCTGTCCAA CACGATTGAA GATGCGGTGC TCGACATCCT TGGCGAGCCG AGCCCGCTGC CGCGTGCGGG CGTGCGGCGT GGGGTGATCT TCGATTGA
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Protein sequence | MVVRPHLHWF RMLLAWRGSV LPQLLPRLFL IFFVSLVAIA VHAHLLPVSV NLSTTPFSLV GIALAVFLGF RNNASYDRYW EARKLWGQLL NTARSLTRQA LTLPRGDGPH DTSGPAADAD VREFAQVLGA LPHALRHQLR HTDARDDLAA RLPVPLLERV MASRYRPIAI VQWLGEWVQR RAQAGTVDGY AALAFDRNLN ELSNSIGGCE RIAGTPLPFA YSVMIHRTVY FFCAALPFGL VESIGSFTPV FAVFVAYTFM AHEAIASQLE DPFGTEDNDL ALNALSNTIE DAVLDILGEP SPLPRAGVRR GVIFD
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