Gene Rpic12D_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0015 
Symbol 
ID8017638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp17872 
End bp18609 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID644828799 
ProductABC transporter related 
Protein accessionYP_002979999 
Protein GI241661639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.619929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG TTGATCTCTG CGCCGTACAC AAGCATTACG GCAACAACCA CGTTCTCAAG 
GGCGTCGACC TGCGCGTGGA GGCCGGCCAG GTGGTCGCCA TCATTGGGCG CAGCGGCTCG
GGCAAGAGCA CGCTGCTGCG GTCCATCAAC GGGCTGGAAG CGATTGACGA CGGGCAGATC
GTCGTGGACA ACGCGGTGCT CCAGGGCTCG CAGGCCACGC CCGCGCGGTT GCGCGCGCTG
CGCCTGAACG TGGGCATGGT GTTCCAGCAG TTCAACCTGT TTCCGCACCT CACAGCCGGC
CAGAACGTGG CGCTGTCGCC CGTGGTGGTC AAGGGCATGA AGAAGGCCGA CGCCAACGAC
CTCGCCCGTC AGATGCTCGT CAAGGTGGGC CTGGCCGATA AGTTCGATGC GTACCCCGAC
CAGCTCAGCG GCGGCCAGCA GCAGCGCGTG GCGATTGCCC GCGCGCTGGC CATGCAGCCG
AAGGTGCTGC TGTGCGACGA GATCACCTCC GCGCTCGATC CGGAACTGGT GAACGAAGTG
CTGGCCGTGG TGAAGCAGCT CGCCGCCGAA GGCATGACGC TGATCATGGT CACGCACGAG
ATGCGCTTCG CGCGTGACGT GGGCGATCAG CTCGTCTTCA TGCACCAGGG GTTGATCCAT
GAAAGCGGGC CGGCCAAGGA GGTGTTTGCC AGCCCCAAGA CGGCGGAACT GGCGGCGTTC
ATTGGCGCGG TGCAGTGA
 
Protein sequence
MPLVDLCAVH KHYGNNHVLK GVDLRVEAGQ VVAIIGRSGS GKSTLLRSIN GLEAIDDGQI 
VVDNAVLQGS QATPARLRAL RLNVGMVFQQ FNLFPHLTAG QNVALSPVVV KGMKKADAND
LARQMLVKVG LADKFDAYPD QLSGGQQQRV AIARALAMQP KVLLCDEITS ALDPELVNEV
LAVVKQLAAE GMTLIMVTHE MRFARDVGDQ LVFMHQGLIH ESGPAKEVFA SPKTAELAAF
IGAVQ