| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0013 |
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| Symbol | |
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| ID | 8017636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 16501 |
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| End bp | 17235 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644828797 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002979997 |
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| Protein GI | 241661637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.38894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATC AATTCGACTT TGGCGCTGTC TTCAGTTACA GCGGCCAGCT CGCGCAGGGC
GCGGCATTCA CGCTCGCGCT CACGGCGGCG GGCGCGGTGC TCGGTGGCGC CATCGGTATT
GTCGGGGGTG TGTGCCGCGC CTGGCGCATC GCTCCGTTCA ATGCGCTGTT CAAGGTGTAT
GTGGAGGGCA TTCGCAACAC GCCGTTCCTC GTGCAGTTGA TGTTCATGTT CTTCGGCTTG
CCCTCGCTGG GCGTGCAGAT CAACGAATGG CAGGCGGCGC TGCTCACGGC GGTGGTCAAC
CTGGGCGCTT ACATCACAGA GATCGTGCGT GCCGGCATTC AAGAAACGCC GCGCGGCCAG
CTGGAAGCGG CCAACGCGCT GGCGATGAGC CGCTGGGCCA TCTTCCGGCA CGTGGTGCTG
CGGCCCGCGC TGCAGAAGGT GTGGCCGGCG CTCAGCAGCC AGATCGTGAT CGTGATGCTG
GGCACGTCGG TCGTGTCGCA GATTGCCGCG CAGGATCTGA CCTTTGCGGC CAACTTCATC
CAGTCGCGCA ACTTCCGCGC GTTTGAAACC TACCTGGTGG TGACGGCGCT GTACTTTGCG
CTGGCGCTGT TGCTGCGTCA GCTGCTGGCC TGGATCGGCC AGCGCTTTAT TGTCGGGCGC
CGCGCGCCTG CGGTGTCCGC TGCACCGCTT GCTACTCCTG CCAACGCAGC CGCCTCCGTT
GGAGACGCCG CATGA
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| Protein sequence | MAYQFDFGAV FSYSGQLAQG AAFTLALTAA GAVLGGAIGI VGGVCRAWRI APFNALFKVY
VEGIRNTPFL VQLMFMFFGL PSLGVQINEW QAALLTAVVN LGAYITEIVR AGIQETPRGQ
LEAANALAMS RWAIFRHVVL RPALQKVWPA LSSQIVIVML GTSVVSQIAA QDLTFAANFI
QSRNFRAFET YLVVTALYFA LALLLRQLLA WIGQRFIVGR RAPAVSAAPL ATPANAAASV
GDAA
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