Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0011 |
Symbol | |
ID | 8017634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 14723 |
End bp | 15487 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644828795 |
Product | GntR domain protein |
Protein accession | YP_002979995 |
Protein GI | 241661635 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCA TTCCATCCTC CGTCGCGCAA GCACTCCAGC AACGCATCCT GAGCGGCGAG TACCCCAGTG GCAGCCGCCT GCCGCCGCAG CGTGAGCTGG CGGAAAGCCT GGGCGTGAGC CGCGCGTCGT TGCGCGAGGC GCTGACGGTG CTCGAAACGC TGGGCCTGGT GGACATCCTC CCCAGCCGGG GCGTGGTGGT GCGCGGCCAG AAGTTTGGCG CAGAAGGGGC GAGTGCCGAG CGCATGCACC GGCCGTTTGC CACGCCGGCG CTGGGCACCC TGTCGCCGCG TCAGTTGATC GAGCTGCGCC TGGTGCTGGA GCCCGGCTGG ACGGCACTGG CCGCCGCGCG CATGCATGCC GCCGGCCTGC GCCACCTGCA ATGGCTGCAG CGGCAGTTGG CCCACGCGCT GGAGCGCAAT GACTTGCTGA GCGCGGCAGA GGCGGATCTG CACTTCCACC TGCTGCTCGC GCAGTTGTCC GGCAACCCGG GGTTGATGGC GATGGCCGGC CAGTTGGAGC ACGCCATCGG CCACAGCCTG CGCCTGCCCT TTGCCCGCAA CGGCGCAGAC GACCACCCCG CGCACGAGCA CGACGCCATC GTGCAGGCCA TTGCCGCGGG CGATACCGCC GCCAGCGCAG AGGCCATGCG CGCGCATCTG CTGTCGGCCG CGCGCCGCAG CGGCATCGAT CTGACTGCGC CGCCCGCCAC GCCCGAACCC ATGCAGCACG AATCGGTTTC CTTTCGCCTC GCCTCGATTT CCTGA
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Protein sequence | MHSIPSSVAQ ALQQRILSGE YPSGSRLPPQ RELAESLGVS RASLREALTV LETLGLVDIL PSRGVVVRGQ KFGAEGASAE RMHRPFATPA LGTLSPRQLI ELRLVLEPGW TALAAARMHA AGLRHLQWLQ RQLAHALERN DLLSAAEADL HFHLLLAQLS GNPGLMAMAG QLEHAIGHSL RLPFARNGAD DHPAHEHDAI VQAIAAGDTA ASAEAMRAHL LSAARRSGID LTAPPATPEP MQHESVSFRL ASIS
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