Gene Rpic12D_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0011 
Symbol 
ID8017634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp14723 
End bp15487 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID644828795 
ProductGntR domain protein 
Protein accessionYP_002979995 
Protein GI241661635 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCA TTCCATCCTC CGTCGCGCAA GCACTCCAGC AACGCATCCT GAGCGGCGAG 
TACCCCAGTG GCAGCCGCCT GCCGCCGCAG CGTGAGCTGG CGGAAAGCCT GGGCGTGAGC
CGCGCGTCGT TGCGCGAGGC GCTGACGGTG CTCGAAACGC TGGGCCTGGT GGACATCCTC
CCCAGCCGGG GCGTGGTGGT GCGCGGCCAG AAGTTTGGCG CAGAAGGGGC GAGTGCCGAG
CGCATGCACC GGCCGTTTGC CACGCCGGCG CTGGGCACCC TGTCGCCGCG TCAGTTGATC
GAGCTGCGCC TGGTGCTGGA GCCCGGCTGG ACGGCACTGG CCGCCGCGCG CATGCATGCC
GCCGGCCTGC GCCACCTGCA ATGGCTGCAG CGGCAGTTGG CCCACGCGCT GGAGCGCAAT
GACTTGCTGA GCGCGGCAGA GGCGGATCTG CACTTCCACC TGCTGCTCGC GCAGTTGTCC
GGCAACCCGG GGTTGATGGC GATGGCCGGC CAGTTGGAGC ACGCCATCGG CCACAGCCTG
CGCCTGCCCT TTGCCCGCAA CGGCGCAGAC GACCACCCCG CGCACGAGCA CGACGCCATC
GTGCAGGCCA TTGCCGCGGG CGATACCGCC GCCAGCGCAG AGGCCATGCG CGCGCATCTG
CTGTCGGCCG CGCGCCGCAG CGGCATCGAT CTGACTGCGC CGCCCGCCAC GCCCGAACCC
ATGCAGCACG AATCGGTTTC CTTTCGCCTC GCCTCGATTT CCTGA
 
Protein sequence
MHSIPSSVAQ ALQQRILSGE YPSGSRLPPQ RELAESLGVS RASLREALTV LETLGLVDIL 
PSRGVVVRGQ KFGAEGASAE RMHRPFATPA LGTLSPRQLI ELRLVLEPGW TALAAARMHA
AGLRHLQWLQ RQLAHALERN DLLSAAEADL HFHLLLAQLS GNPGLMAMAG QLEHAIGHSL
RLPFARNGAD DHPAHEHDAI VQAIAAGDTA ASAEAMRAHL LSAARRSGID LTAPPATPEP
MQHESVSFRL ASIS