Gene Rpic12D_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0008 
Symbol 
ID8017631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp10937 
End bp12040 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content52% 
IMG OID644828792 
Producthypothetical protein 
Protein accessionYP_002979992 
Protein GI241661632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.642073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATG CCCTAATGAT TGACAACTGG ACGTTGCAGG ACGTTGAAGC CCTAATGCAG 
AACGGGATCA AGCCGGAAAA CGCTTCCGAG ATAGCAATCT CGGAAGACCG GCAGACACAT
CGATTCGATC CAGTTCCATC GGGCACGATC CAGATAGACG CTCTCATTAG TCTGCTTACC
AACATCGTCT GTTTCGACCA CTTGCAAGTT GACAGTGGTT TCGTTGAAAC CTGGCAGCGC
GACGGCGGTT TTTTGGCACC GCTCGAGAGT TTAGGAGTTG TGCGACCAGA CGACTACACG
GCGCTTGGAC AGGATCTCGA CGATATTCGA GAGATGATTC TCTCCGAGCT TTGTGTGACC
GAATCTCTTC GCACGGCTAT GCAAAAGATA AAGCTGGAGT GGGAGCTAAC GCGCTCCACA
TCTTCACCTC ACCTCTCAGC TCTAGTTTGG GGTGGCGCTG GCCTCCTCGC CAGAAGCGAC
CTCACCTCGA CACCTTACTT CGGGCATCCA TTCCGACGAA GGCTCGTTGC GGAGACCCAG
ATGTTTTATC ACCAAGCGAA TGCCGCTCAG CAGTTTGAGA AATTCATCGA GACGGAGAGA
GCCAAGATGT TTCGCTACCG CAACGAGCGG TTTGGCGGCG CGATGGCGAA GGTCGTGCTT
CCGCCCATAC CCGCTTACAT CATCGAAGAA TCAAACTCTA TTCATGATCT CATTCCAGTG
GCAGTACAGA TGCGTGATAA GTACGTAGGC CTGCGACAGT GGCTTGCGGA CTATCAACGA
GCAATCGAAG AAGAAGATGA AGGAAAGCAA CTCCGCTTCG AGCAAACCCT GACAGCCGTC
GGCAAGTCCA TTCAGGTTAA GTACGGAGCG GAAAAGGCCG GTTCTCTCGG CATATCGCTG
AGCGCGGCAT TTTTTAAAGC AGATGTATCG AGAAGGCTTG TCGACGGAAC GCTTAATAGA
TTTGGCGTAC GTTCGACGTT GGCAAAGCTG ATCATGGCAC CGCGAGGTCA ACAAGCGCTA
ACAAAGCTAA TCGGAATGCT CGGAGAATCC AAATCTAGCT TGGGGCGCAC TGTACTGCTT
AGTTGTCAGA AGCGATTCAG TTGA
 
Protein sequence
MGNALMIDNW TLQDVEALMQ NGIKPENASE IAISEDRQTH RFDPVPSGTI QIDALISLLT 
NIVCFDHLQV DSGFVETWQR DGGFLAPLES LGVVRPDDYT ALGQDLDDIR EMILSELCVT
ESLRTAMQKI KLEWELTRST SSPHLSALVW GGAGLLARSD LTSTPYFGHP FRRRLVAETQ
MFYHQANAAQ QFEKFIETER AKMFRYRNER FGGAMAKVVL PPIPAYIIEE SNSIHDLIPV
AVQMRDKYVG LRQWLADYQR AIEEEDEGKQ LRFEQTLTAV GKSIQVKYGA EKAGSLGISL
SAAFFKADVS RRLVDGTLNR FGVRSTLAKL IMAPRGQQAL TKLIGMLGES KSSLGRTVLL
SCQKRFS