| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5308 |
|---|
| Symbol | |
|---|
| ID | 6413009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5728682 |
|---|
| End bp | 5729557 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642715197 |
|---|
| Product | 5'-methylthioadenosine phosphorylase |
|---|
| Protein accession | YP_001994269 |
|---|
| Protein GI | 192293664 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGG CCGTGCTCGG CATTATCGGC GGCTCCGGGA TCTATGATTT GCCCGGGCTG
GAAGACGTCC GAGAGGAAGC GATCGCGAGC CCGTGGGGCC AGCCGTCTTC CGCGGTGCGG
CGCGGCAATA TCGCCGGCCT GCCGATCGTG TTCATGCCGC GTCATGACAA GGGCCACCGG
CTGTCGCCCT CCGACATCAA CTATCGCGCC AATATCGACG TGCTCAAGCG CGCCGGGGTC
ACCGATCTGA TCTCGCTGTC GGCCTGCGGA TCGTTCAAGG AAGAGCTGCC GCCCGGCACC
TTCGTGCTGG TCGATCAGTT TGTGGACCGC ACCTACAAGC GCGAAAGCTC GTTCTTCGGC
AAAGGCTGCG TCGCCCACGT CTCGATGGCG CACCCGGTGA GCCCGCGGCT GCGCATCCAT
CTTGCGGCCG CGGCGGAGGC CGAGGGCATT CCGGTAGCGC GCGGCGGCAC CTATCTGTGC
ATGGAAGGCC CGCAGTTCTC CAGCTACGCG GAGAGCATGA CCTACAAGCA GCTCGGCTAT
TCGGTGATCG GCATGACCAA CATGCCGGAG GCCAAGCTCG CCCGTGAGGC GGAAATTTGC
TACGCGACGG TGGCGATGGT CACCGATTTC GACTGCTGGC ACCCCGACCA TGACGCGGTG
ACGGTGCAGG ACATCGTCCG CGTTCTGACT TCCAACGCCG AGAAGGCCAA GAGTCTGGTG
GCGCGGCTGG CGCAGGACTT CCCGCGCGAG CACGAGGAAT GCCCGATCGG CTCCGACCGC
GCCCTCGATG CCGCCTTCAT CACCGCCCCC GAAGCGCGCG ATCCGGAACT GCTGAAGAAG
CTCGACGCGG TGGCCGGGCG GGTTTTGAAG GCGTAA
|
|---|
| Protein sequence | MTKAVLGIIG GSGIYDLPGL EDVREEAIAS PWGQPSSAVR RGNIAGLPIV FMPRHDKGHR
LSPSDINYRA NIDVLKRAGV TDLISLSACG SFKEELPPGT FVLVDQFVDR TYKRESSFFG
KGCVAHVSMA HPVSPRLRIH LAAAAEAEGI PVARGGTYLC MEGPQFSSYA ESMTYKQLGY
SVIGMTNMPE AKLAREAEIC YATVAMVTDF DCWHPDHDAV TVQDIVRVLT SNAEKAKSLV
ARLAQDFPRE HEECPIGSDR ALDAAFITAP EARDPELLKK LDAVAGRVLK A
|
|---|
| |