| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5238 |
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| Symbol | |
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| ID | 6412938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5648585 |
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| End bp | 5649304 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642715128 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001994201 |
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| Protein GI | 192293596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC ATCTCGACTC CCAGGCCGAC CTCGAGGACG CCATCACCAC GCTGGTGAAG
CGGGACCCAC GGCTGAAACC CGTGCTTCAG GTCGCCGGCA TACCGGCGCT GCGGCGGCGC
GAGCCGGGCT TTGCCGGGCT CGCCGCAATC GTCTGCGGTC AGCAGCTTTC GACCGCCTCG
GCAGCAGCGA TCTGGGGCCG GGTCTCGGCG GCGTTCGATC CGTTCGAGCA CGACACGATC
AAGCGGGCGC GGAGCGATCG GCTGGCGCGG CTCGGCCTGT CGACCGCAAA GATCAAGACG
CTGAAGGCGC TCGCCAAGGA GCTCGCCGCC GAACGGCTCA ACCTCGATGT GCTGGCCGAA
GAAGACGCCG ACGCCGCCCA CGCCACGCTC ACCGCGCTGC ACGGCATCGG GCCGTGGACC
GCCGACATCT ATCTGTTGTT CTGCCTCGGC CACGGCGACG CCTGGCCGGC CGGCGACCTC
GCGGTGCAGG AGGCGATGCG GATCGGCCTC GGCCTGAAAG CGCGCCCGAC CGTGAAGCAG
ATGGCACCGC TCGCCGAACC CTGGCGCCCG CTGCGCGGCG CCGCCGCGCA TCTGTGGTGG
GCCTACTACC ACGCGGTGAA GCGGCGCGAG GGCGTGATCG GCGACGACAA GGCAGCGAAA
GCCGTGGCGA AGAAAGTTAC GGCAAAGACG CCGCGAACTC GGAAGTCACC AGCACGCTGA
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| Protein sequence | MTIHLDSQAD LEDAITTLVK RDPRLKPVLQ VAGIPALRRR EPGFAGLAAI VCGQQLSTAS
AAAIWGRVSA AFDPFEHDTI KRARSDRLAR LGLSTAKIKT LKALAKELAA ERLNLDVLAE
EDADAAHATL TALHGIGPWT ADIYLLFCLG HGDAWPAGDL AVQEAMRIGL GLKARPTVKQ
MAPLAEPWRP LRGAAAHLWW AYYHAVKRRE GVIGDDKAAK AVAKKVTAKT PRTRKSPAR
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