| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5235 |
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| Symbol | |
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| ID | 6412935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5645446 |
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| End bp | 5646339 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715125 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001994198 |
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| Protein GI | 192293593 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.192166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCAGA TCCGCTACGC CTATGCGGTC GCAGTCGATG CGCTCTATAC GTTCCTGGCC
GACGACGGAT GGGCGATCGC CAGCCATATC GCGCTGTCGA CACTGATGGC GCTGTTTCCG
TTCCTGATCG TGCTCACCTC GCTGGCCGGC TTCGTCGGCT CGCGCGAACT CGCCGACAGC
GCCGCCGAGC TGTTGCTCGA TGTCTGGCCG GCGCAGGTCG CCAGCACGCT GTCAGGCGAG
ATCCATGACG TGCTGACCAC CACCCGCGGT GGGGTGCTGA CCATCGGCCT GGTGCTGGCG
CTGTATTTCG CCTCCAACGG CGTCGAGAGC CTGCGGGTCG GGCTCAACCG CGCCTATGCG
GTGATCGAGC CGCGGCCTTG GTATTTGCTG CGGCTGGAGT CGATCGGCTA CACGCTGGTG
GCGGCGTTCA CCGCGCTGGC GATGGGGTTT CTGATCGTGC TGGGGCCGCT GATCGTCGCC
ACCGCGCGGC ACTACGTGCC GCTGCTGGTG CACGATAACG AGCCGCTGCT GACGTTCGCG
CGCTACGGTA TCGCGATCAC AGCGCTGACC GTGGCGCTGT TTCTGCTGCA CGCCTACCTG
CCGGCGGGGC GGCGCTCGTT CCGGCAGATC CTGCCCGGCA TCGTGTTCAC GATCACGGCC
TCGCTGATCT CCGGCATGAC CTTCGGCATG TATCTGGCGC GGTTCGCCAA TAACTACGTG
TCGATGTATG CGGGCCTGGC CTCGGTGATC ATCGCGCTGG TGTTTCTGTA TTTCATCGCC
GCGATCTTCG TTTACGGCGG CGAACTCAAC GCCGCGATCA TCAAGTCGCG GCTGCCCGAG
GGGACGACGC TGCAAGAAGC GCAGTTGCGA GCGCCCGGGG CGAAACCGGT TTGA
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| Protein sequence | MRQIRYAYAV AVDALYTFLA DDGWAIASHI ALSTLMALFP FLIVLTSLAG FVGSRELADS
AAELLLDVWP AQVASTLSGE IHDVLTTTRG GVLTIGLVLA LYFASNGVES LRVGLNRAYA
VIEPRPWYLL RLESIGYTLV AAFTALAMGF LIVLGPLIVA TARHYVPLLV HDNEPLLTFA
RYGIAITALT VALFLLHAYL PAGRRSFRQI LPGIVFTITA SLISGMTFGM YLARFANNYV
SMYAGLASVI IALVFLYFIA AIFVYGGELN AAIIKSRLPE GTTLQEAQLR APGAKPV
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