Gene Rpal_5192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5192 
Symbol 
ID6412892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5593933 
End bp5594661 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID642715082 
Productputative exported protein of unknown function 
Protein accessionYP_001994155 
Protein GI192293550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00638818 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAAAG CCGTCACTCT TTCTGCGCTG GTGTGCGTGC TCCTGGCGAG TGCGTCCGCC 
GCCAGCATTC TGGCCCGCGC CAGCGTTCCC GCCGCGGGAC TGGCCGGCGT GGCCACGGTC 
GAGCGTCCTA TCAGCAACCG CGAATTCAAG GCCGACAAGC TCGAAGTCGC GCTGCAGCCG 
GACGAACCTG AAGTTCAGGC CGCGCAAGAC CAGCCCGCCG ACGCTCAGGC CGCGACCACC 
ACCGCGGACG CGACCGTGCC GGCCAAGCCG CTACAGCTGG CTTACGCGAC CGATGATCTG 
CCGGTTGCCG CAATCCCGGA AGCGGCTCCT TCGGACCCCA GCGTCGCAGC GCCCAAAGCG 
GTCACCAAGC TGCCGCCGGT GATCGCTACG ACTCCGCTCC AGAAGCCGAA GCCCAAGCCT 
GCCGCGAAGG AAGCGCTGCT CAGCGACGGC CAGATCGCAC AGATCAAGAC TCGCCTCAAT 
CTGTCGTCGT CGCAGGAGTA TTATTGGCCG TCGGTCGAGC AGGCGTTGCG CGCGATCGGC 
CGCAAGCTGC ATGCGACTGC GCGCGGCCGC GACAGCAGCA CACCGCCGAT CGATCCGGAC 
AGCGCTGAAG TCCAGCAGCT CAAATACGCC GCGATGCCGC TGCTGTTTCA ACTACGCGAG 
GATCAGAAGC AGGAAGTGCG CAAGCTCGCC CGCGCCATGG GCCTCGAACA GGTCGCGCAG 
CAGATCTGA
 
Protein sequence
MTKAVTLSAL VCVLLASASA ASILARASVP AAGLAGVATV ERPISNREFK ADKLEVALQP 
DEPEVQAAQD QPADAQAATT TADATVPAKP LQLAYATDDL PVAAIPEAAP SDPSVAAPKA 
VTKLPPVIAT TPLQKPKPKP AAKEALLSDG QIAQIKTRLN LSSSQEYYWP SVEQALRAIG 
RKLHATARGR DSSTPPIDPD SAEVQQLKYA AMPLLFQLRE DQKQEVRKLA RAMGLEQVAQ 
QI