Gene Rpal_5190 details

Gene Information

• Locus tag: Rpal_5190
• ID: 6412890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5592590
• End bp: 5593363
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642715080
• Product: hypothetical protein
• Protein accession: YP_001994153
• Protein GI: 192293548

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.391316
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTCCA TCTATCGCAT CGACGGCATC AATATCGAAA CCAGCCCGAA CGCGGCAGGG 
CCGTGGGACC CGACGATGCA GCACGGCTCG CCGCCGTCTG CCCTGGTCAC TTATCTCGCC 
GAGCAGATCC CGACGCCGTC GCCGATGCAG ATCTCACGCG TCACCGTCGA CCTGTTGCGG 
CCGGTCCCGG TGGGACCGCT GACCTACCAG ACTGAAGTAC TGCGCGAAGG CCGCAAGATT 
CAGCTCTGCG CCGTGCGGCT ACTCTCGAAG GGCGTCATCG TGGTCGGCGC CACGGTGCTG 
AAGATCCGCG TCGCGCCACC TGATCTGCCG GATGACATCG AGCATCCGCC GCTCGACGTG 
CCGCATCCCG ACGATTGCCC GGTTCTCGAC CCCGGCTTCA CCCGCAATCC GTTCGTCGGC 
GGCATGTCGC TGCGCAAGGT CTATGGCGGC TTCGGCGAGA TCGGCCCCGG CGCCACCTGG 
TATCGTGCCG ACCGCGCCCT GGTCGAAGGG CAACCGACCT CGCAGGCGAT GCGCGCGGTG 
GTCGCCGCTG ATTTCAGCAA CGCGACCTCG TCGATCCTCG ACTTCAAGCA CTGGACCTTC 
ATCAACGCCG ACCTCAACGT GTTCTTCGCG CGGCAGCCGA TCGGCGACTG GGTACTGCTG 
AACTCCGAGA TGTGGCTGGG GCCGGACGGC GCCGGGATCG CCTCGTCGAA GCTCGCAGAC 
GTCCACGGTT ATTTCGGCCG AGCGATCCAG AACCTCGTGG TCGAACAGCG CTGA 

 

Protein sequence

MDSIYRIDGI NIETSPNAAG PWDPTMQHGS PPSALVTYLA EQIPTPSPMQ ISRVTVDLLR 
PVPVGPLTYQ TEVLREGRKI QLCAVRLLSK GVIVVGATVL KIRVAPPDLP DDIEHPPLDV 
PHPDDCPVLD PGFTRNPFVG GMSLRKVYGG FGEIGPGATW YRADRALVEG QPTSQAMRAV 
VAADFSNATS SILDFKHWTF INADLNVFFA RQPIGDWVLL NSEMWLGPDG AGIASSKLAD 
VHGYFGRAIQ NLVVEQR