| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5167 |
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| Symbol | |
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| ID | 6412867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5570293 |
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| End bp | 5571249 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715057 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001994130 |
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| Protein GI | 192293525 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTATA AGACCGCCGG TGCGGAACCC CTAATTATGC AACCACAGAT TGCGATGTTG
ATCAATGGCC GACCGGCCGG CTGGCGCGCA GCCGTGGCGG GCCTGGCGCT CGCCGTGACG
ACGCTGCTGA CGCCTGGCGC CGCGCGGGCT GCGGAGACCG CGCCCGAGGC GAAGGCGATC
GCGGATGCGA CGGCGCATGC AGTGCCGGGG TTTTGGGATC CGCGGCGGCG TCCGGAGCGG
CCGGACATGT CGCGCCTGAC GATGATCCGG TTCCTGACCG AGATCGATTA TCCGCCGTTC
AACTTCACCG GGGCCGACGG CAATCCGGCG GGGTTCAACG TCGATCTGGC GCGCGCGCTG
TGCGACGAGA TCAAGATCAC CTGCACGGTG CAGATGCGGA AGTTCGAGAC CCTGCTCGAC
GCGCTCGCCG GCAATCGCGG CGATGCCATC ATCGCGTCGC TGGCGGTGAC GCCGCAGACC
CGCACCAAGC TGGACTTCAC CGATCCCTAT TACCGCACGC CGGCGCGCTT CGTCGCCCGC
AAGGATGCGG TGATGCCGGA GATGCGCCCC GAGTTTCTCG AAGGCCGCAA GGTCGGCGCG
GTCGCAGGTT CGGCGCATGA GGCCTATCTC AAGGCGATGT TCACGGACGC CGAGCTGCAT
TCCTATCCGA ATGCCGAGGC GCTGCGTGCC GCGCTGAAGC GCGGCGAGGT GGACTTCATC
TTCGGCGACG CGATCTCGCT GGCGTTCTGG ATCAACGGCA CCGACTCGGA GAATTGCTGC
GCGTTCTCCG GCGCCCCGTT CCTGGAGAGC CGCTATTTCG GCGAGGGCGT CGGCATCGCG
GTGCGCAAGG GCAACGACAC GTTGCGCCAG GCGCTGAATT GGGCGCTGTT CCGGGTTTGG
GAAAAGGGCC AGTACACCGA CTTGTGGCTC CGGTATTTTT CCGTCAGCCC GTTTTGA
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| Protein sequence | MVYKTAGAEP LIMQPQIAML INGRPAGWRA AVAGLALAVT TLLTPGAARA AETAPEAKAI
ADATAHAVPG FWDPRRRPER PDMSRLTMIR FLTEIDYPPF NFTGADGNPA GFNVDLARAL
CDEIKITCTV QMRKFETLLD ALAGNRGDAI IASLAVTPQT RTKLDFTDPY YRTPARFVAR
KDAVMPEMRP EFLEGRKVGA VAGSAHEAYL KAMFTDAELH SYPNAEALRA ALKRGEVDFI
FGDAISLAFW INGTDSENCC AFSGAPFLES RYFGEGVGIA VRKGNDTLRQ ALNWALFRVW
EKGQYTDLWL RYFSVSPF
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