Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5141 |
Symbol | |
ID | 6412841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5534515 |
End bp | 5535999 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642715031 |
Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_001994104 |
Protein GI | 192293499 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCTGG TCGTGGTTTC GAACCGAGTT GCCCGAGCGT CGGGGAACGA ACCGATGACG GGAGGGCTGG CAGCCGCGTT GCTGCCAGTG GTGGAAAAAT CCGGGGCGAT ATGGGTCGGC TCGAGCGGTC GCGTCCGTGA TGGCGTTCAC CGCGAGCCGT TCGCTGAAAT CGAACCGCTC GGCGCTGGCG CTCTCGCCAT GCTGGATCTG CCCGCCGCAC ATTACGGCGG TTACTACGAG GGCTTCGCCA ATTCGGCGCT ATGGCCTGCG CTGCATTCCC GCCCGGATCT GATCCGGGTG TCGCACGACG ATTATCGCTC CTATCGCGAA GTCAACGCCT TCATGGCGCG CGCGCTGCTG CGGTTCCGCA AGCCGGATAC CGCGTTTTGG ATTCAGGATT ATCACTTCCT CGCTTTGGGC GCGGAACTGC GCCAGCTCGG CGTCCAGCAT CCGATCGGGT TCTTCCTGCA TACGCCATGG CCGTCGCGGG CGACGATTGG ATGCGTACCC CATCACCGCG AACTGATCGA AGCGATGCTG ACCTATGATC TGATCGGGTT CCAGACCGAA GAGGATCGCC GCAATTTCCT CGGTTACGTC GAATCGGAAC TCGGCCTGAA GATCGACGGC AGCGAGGTCT CGACCACGCA CGGCACCGCG CGCTGCGAGG TGTTCGCAAT CAGCATCGAC GCCGACGCAT TCGCCCAACA AGCACAGAAG GCGATGACCC ACCCCGAAGT CTCCCGCCTC CGCAAGAGTC TGAACGGCGA AAAGCTCGTA ATTGGCGTCG ATCGTCTCGA TTACTCGAAG GGGCTGATCA ACCGCGTCAA GGCGTTCGAC AAGATGTTGA CCGACCGGCC GGCCTTGCAG CGGGTGGTGT CGCTGCTGCA AATCGCGACC CCGTCCCGCG GCACGATCGA GGCCTACGGC AATCTGCAGG GCGATCTCGC CAAGCTGGTC AGCGACGTCA ACGGCCGGCT CGGCGAGGTC GACTGGACCC CGATCCGCTA TCTCAACAAG GGGTATCGCC AGAGTGTGCT CGCGGGCCTG TACCGCTCGG CTCATGTCGG GTTGGTCACA CCGCTGCAGG ACGGCATGAA CCTGGTGGCC AAGGAATACG TTGCGGCTCA GAACCCGCTC GATCCCGGCG TCCTGGTGCT GTCGAAATTC GCCGGGGCCG CCAATGAGCT CGACACCGCC CTGCAGGTCA ATCCGCACGA CATCGAGGGC ATGTCGCGAG TGATAGCCAC CGCGCTGGCG ATGCCGCTGA CAGAGCGGCG GCTGCGATGG GAGGCGATGA TGGCCAAGCT GCGTGACAAC AGCATCCGCC GCTGGTTCGC GGACTTCCTC GCCGCGCTGG ATCAAGCCCA CACCGCCAAT CGCAGTGTCG GTCCGATCCC GCTGGCGCCG CCGCCCTCCA TCATGATGGC GGGGGGGCGG TCACGGCTCG CGCCGCGCGC TGCTGGTGGC GCAGTGCTGC AATAG
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Protein sequence | MNLVVVSNRV ARASGNEPMT GGLAAALLPV VEKSGAIWVG SSGRVRDGVH REPFAEIEPL GAGALAMLDL PAAHYGGYYE GFANSALWPA LHSRPDLIRV SHDDYRSYRE VNAFMARALL RFRKPDTAFW IQDYHFLALG AELRQLGVQH PIGFFLHTPW PSRATIGCVP HHRELIEAML TYDLIGFQTE EDRRNFLGYV ESELGLKIDG SEVSTTHGTA RCEVFAISID ADAFAQQAQK AMTHPEVSRL RKSLNGEKLV IGVDRLDYSK GLINRVKAFD KMLTDRPALQ RVVSLLQIAT PSRGTIEAYG NLQGDLAKLV SDVNGRLGEV DWTPIRYLNK GYRQSVLAGL YRSAHVGLVT PLQDGMNLVA KEYVAAQNPL DPGVLVLSKF AGAANELDTA LQVNPHDIEG MSRVIATALA MPLTERRLRW EAMMAKLRDN SIRRWFADFL AALDQAHTAN RSVGPIPLAP PPSIMMAGGR SRLAPRAAGG AVLQ
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