| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5129 |
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| Symbol | |
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| ID | 6412823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5514855 |
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| End bp | 5515943 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642715014 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001994093 |
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| Protein GI | 192293488 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGGAC TGAAACGCTT CAGACTGCCG GCCTTGGCTT CGGCGGCATT CATCGCACTG
GGGGCGGGGA CCGCCGCAGC CCAGAGCAAT GTCGTGATCA TGCAGGATCC GGGCGGCGGC
TACGGCGATG CGCTGCGCAA GGTGATGTAT GACCCGTTCG AGAAGGAAAC CGGCATCAAG
GTCGTCACCG TGCAGGAAGC CCGCAGCGGT CCGCGCATCA AGGCGCAGGC CGAAGCCGGC
AAGGCGCAGT GGGACCTGAC CTTCATCTTC GATCAGGAAA CCAAGCTGCT TGGCGATTGC
TGCCTGGCCG ACATCGACTA TTCGAAGCTG TCGGAGTCCG CGCACAAGAC CCTGGCGGCG
ATGCCGGACA ATCTGAAGCG CAAGAAGGGC GTCGCGCTGC AAGTGATCGG CGTCGGCCTC
GTCTACAACA AGGACAAGTT CAAGGGTGAC AAAGCCCCGC AGACCTGGGC CGATTTCTGG
GACGTGAAGA AGTTCCCGGG CCGCCGTTGC ATGCCGGCGT GGCCGCGCTT CACCTTCGAA
GCGGCGCTGA TGGCCGACGG CGTCACCAAG GACAAGCTGT ATCCGATCGA CATGGATCGG
GCGCTCAAGA AGCTCAAGGA GATCAAGCCG CACGTGGTGA AGTGGTGGAC CACCGCCGCG
CAGCCGCCGC AGCTCATTCT CGATGGTGAA GCCGACATGT GCCTGGCTTA TACCGGCTCG
ATGAGCAAGC TGGCGCTGGA AGGCGCGCCG ATCGACCTCA CCTTCAACCA GGGCTTCGTC
TATTACGACT TTTTCTCGAT TCCAAAAGGC GCGCCGAACT ACGACAATGC TCTGAAGCTG
CTGTCTTGGC GTCTTGATCC GAAGCGCGCC GCGCAACTGA CATCCACCTT CCCGGTGGCG
CTGCCGTCGA AGGTCGTGTT CGACGCGGCG ACGGATAAGA ATATCGCGCG GTACTGGGCT
AACAATCCCG AGAACGTCGC CAAGGCGATC GAGTGGAGCC CGGACTTCTG GGGTGCTCCG
TCGCCGGCGG GGAATTCCAC CAATGAAGAA TACGGACAAG AAAAGCTGAA CGCGATGCTG
GCCCAGTAA
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| Protein sequence | MLGLKRFRLP ALASAAFIAL GAGTAAAQSN VVIMQDPGGG YGDALRKVMY DPFEKETGIK
VVTVQEARSG PRIKAQAEAG KAQWDLTFIF DQETKLLGDC CLADIDYSKL SESAHKTLAA
MPDNLKRKKG VALQVIGVGL VYNKDKFKGD KAPQTWADFW DVKKFPGRRC MPAWPRFTFE
AALMADGVTK DKLYPIDMDR ALKKLKEIKP HVVKWWTTAA QPPQLILDGE ADMCLAYTGS
MSKLALEGAP IDLTFNQGFV YYDFFSIPKG APNYDNALKL LSWRLDPKRA AQLTSTFPVA
LPSKVVFDAA TDKNIARYWA NNPENVAKAI EWSPDFWGAP SPAGNSTNEE YGQEKLNAML
AQ
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