Gene Rpal_5085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5085 
Symbol 
ID6412779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5471719 
End bp5472825 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID642714970 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001994049 
Protein GI192293444 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC CCGCCAAGCC TGCCCCGCAG CCCGCCGGAC GCGCCGCCGC CAAGAAGGAG 
CTGCCCGAGC ATTTCAAAGC CTATAAGCAC GTCTGGGTGT TCATCGAGCA GGAGCGTGGT
CACGTTCACC CCGTCTCCTG GGAGCTGATG GGCTCCGGTC GCCGCCTCGC CGACAAGCTC
GGTGTCGAAC TCGCCGCGGT GGTGATCGGT CCGACCGGCG ACGCCACCAA GGCAGCGGTC
GCCGAGTCGT TCTGCTACGG CGCTGACCTC GCTTACGTCG TCGCCGACGA CGTGCTGACG
GACTATCGCA ACGAGTCCTA CACCAAGGCG CTGACCGATC TGGTCAACAC CCACAAGCCG
GAGATCCTGC TGCTCGGTGC CACGACGCTC GGCCGCGACC TCGCCGGCGC AGTGGCGACC
ACGCTGCTCA CCGGCCTGAC TGCCGACTGC ACCGAGCTTG AGGTCGACTC CGACAATTCG
CTCGCCGCGA CGCGTCCGAC CTTCGGCGGT TCGCTGCTGT GCACGATCTA CACGCTGAAC
TTCCGCCCGC AGATGGCGAC CGTACGGCCG CGCGTGATGT CGATGCCCGA ACGGGTCGAG
AAGCCGGTCG GCCGCGTCAT CGAATTTCCG CTCGGTTTGG TCGAAGCCGA TATCGTCACC
AAGATCCTGG CCTTCGTGCC GGATCGCGAC AAGGCGACCT CCAACCTCGC TTATGCCGAT
ATCGTGGTGG CCGGTGGCCT CGGGCTCGCT TCGCCGGAGA ACTTCCAACT GGTGCGCCAG
CTTGCCGGCG TGCTCGGCGC CGAATACGGC TGTTCGCGGC CGCTGGTGCA GAAGGGCTGG
GTGTCGGCCG ACCGCCAGAT CGGCCAGACC GGCAAGACTA TTCGGCCGAA GCTGTACATT
GCCGCCGGCA TCTCGGGCGC GATTCAGCAC CGCGTCGGCG TCGACGGCTC CGACTTGATC
GTCGCGATCA ACACCGACAA GAACGCGCCG ATCTTCGACT TTGCCCATCT CGCTCTCGTC
ACCGATGCGA TCCGGCTGCT GCCGGCGCTG ACCGAAGCAT TCCGCAAACG GCTGTCTGCG
CACACCCGCG ACCGGATCGC GAGCTAA
 
Protein sequence
MSQPAKPAPQ PAGRAAAKKE LPEHFKAYKH VWVFIEQERG HVHPVSWELM GSGRRLADKL 
GVELAAVVIG PTGDATKAAV AESFCYGADL AYVVADDVLT DYRNESYTKA LTDLVNTHKP
EILLLGATTL GRDLAGAVAT TLLTGLTADC TELEVDSDNS LAATRPTFGG SLLCTIYTLN
FRPQMATVRP RVMSMPERVE KPVGRVIEFP LGLVEADIVT KILAFVPDRD KATSNLAYAD
IVVAGGLGLA SPENFQLVRQ LAGVLGAEYG CSRPLVQKGW VSADRQIGQT GKTIRPKLYI
AAGISGAIQH RVGVDGSDLI VAINTDKNAP IFDFAHLALV TDAIRLLPAL TEAFRKRLSA
HTRDRIAS