| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5053 |
|---|
| Symbol | |
|---|
| ID | 6412747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5436567 |
|---|
| End bp | 5437055 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642714938 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001994017 |
|---|
| Protein GI | 192293412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.581815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC GTTTCGCCGC TCCCGTCCTC GCCGCCGGCT TCGCTGGTGC GCTGCTGCTC
GCACCGACTG CGGGCGTCGC TGCGGGCGCT TTCGACGGCC TGGCCGGCTA CTGGGCGGGT
AATGGACGCG TGCAGATGTC GGACGGCTCG GCCGAGCGGA TTCGCTGCCA GGCGTCGTAT
GCGGTCGGCG GCGGCGGCCG TCTGATGCAG CAGAAGCTGA CCTGTGCCAG CGACAGCTAC
AAGTTCGACA TCTCGAGCAA CGTCGAAGAA TCCGGCGGCC GCATCTCCGG TACCTGGGGC
GAGGCGACCC GCAACGTTAC CGGCAATGTG TCGGGCACGA TGCGTGGCGG CAGCCTCTCG
GCGCAGGTGG GAGGACCGGG CTTCAACGCC TCGTTGTCGG TCGTGACCCG CGGCACGTCG
CAGTCGGTCA CGATCGTGCC GCAAGGCAAT GACGTGCGGC AGATCTCGGT CTCGATGAAG
CGCCGCTAA
|
|---|
| Protein sequence | MTFRFAAPVL AAGFAGALLL APTAGVAAGA FDGLAGYWAG NGRVQMSDGS AERIRCQASY
AVGGGGRLMQ QKLTCASDSY KFDISSNVEE SGGRISGTWG EATRNVTGNV SGTMRGGSLS
AQVGGPGFNA SLSVVTRGTS QSVTIVPQGN DVRQISVSMK RR
|
|---|
| |