| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4920 |
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| Symbol | |
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| ID | 6412611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5298520 |
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| End bp | 5300148 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714802 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_001993884 |
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| Protein GI | 192293279 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.610425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGCA AACTTGCGCT GGGCGCGAGT GCGTTGACGA TCGGCTTGCT GACGCTGTCA
GTCGCACACG CCGACGGCTA TCAGGTCACC AAGCTGGTCC CGGGCTCGGC GTTTCACGGC
GTGCACGGCC TTGCGGTCGA CAAGGCCGGC AAGCTGTTCG CCGGCAGCGT CGCCGGCGCA
GCGCTGTATG AAGTCGATCG CGCCGCAGGT ACCGCCAAGA TCGCCGTGCC GACGCCGGAA
GGCATGGCCG ACGACATCGC GATCGCGCCG GACGGCACGA TGGCGTGGAC CGCCTTCCTC
ACCGGCGATC TCTATGCGCG CAAGGGCGAC GGCCCGATCA AGAAGCTGGC GTCCGGCCTG
CCGGGCATCA ACTCGCTCGC CTTCCGCAAG GATGGACGGC TGTACGCCAC CCAGGTGTTT
CTCGGCGATG CGCTGTACGA GATCGACGTC GAGGGCGCCA AGCCGCCACG CAAGATCATG
GAGAAGATGG GTGGGCTGAA CGGCTTCGAA TTCGGCCCCG ACGACAAGCT CTACGGCCCG
CTGTGGTTCA AGGGCCAGAT CGTCAAGGTC GATGTCGACA AGGGCGAACT CAGCATCGTC
GCCGACGGCT TCAAGGTGCC GGCAGCGGCG AATTTCGACT CCAAGGGCAA TCTGTGGGCG
CTCGATACGG CGCTCGGTCA GCTGGTCAAG ATCGATCCGA AGACCGGCGC CAAGCAGGTC
GCGGCGCAGC TCAAGCCGGC GCTCGACAAT CTCGCGATCG ATGCGAGCGA CCGCATCTTC
GTCTCCAACA TGGCCGACAA CGGCATCCAG GAAGTCGATC CGGCGACCGG CGCGGCCAAG
CAGGTGATCA TCGGCAAGCT GGCGTTTCCC GGCGGCATCG GCGTCGTTTC CGACGGCGGC
AAGGACACCA TCTACATCGC CGACGTCTTC GCCTATCGCA CCGTCGATGG CGCCAGCGGC
GAGGTGCGCG AAGTGGCGCG GATGCACGCC GACGGCACCA CGCTCGAATA TCCGATGAGC
GCCACCGCCA AGGGCGACGA GGTAATCCTG TCGAGCTGGT TCACCGGCAC GGTGCAGACG
ATCGACCGCA AGACCGGCCA GAGCCGCGAC ATGCTGCACG GCTTCAAGGC GCCTTACGAC
GCGATCCGGC TCGGCGGCGG CAAGCTGCTG GTCGCCGAAC TCGGCACCAA GTCGCTGGTC
GAAGTCTCGG GCGAGCACGG CAAGGACCGC AAGGCGATCG CCACCGATCT TGCAGGTCCG
GTCGGACTGG TCCTCGGCAA AGACAGCGCG GTGTATGTCA GCGAAGCGTT CGCCGGCCAG
ATCAGCAAGA TCGATCCGGT GACCGGCGCC AAGACGGTCG TCGCCAAAGA CCTGAAGATG
CCCGAGGGCA TCGCGCTCGC GCCGTCCGGC AAACTGATCG TCGCCGAAGT CGGTGCCAAA
CGCGTGGTCG AGGTCGATCC GGCCAGCGGC AGCGTGACGG AAATCGCCGG CAATCTGCCG
ATCGGCCTGG TCGGCGCCCC CGGCCTGCCG CCGACCAACA TGCCGACCGG CGTCGGTGTC
GGCGCTGGCG GCACGATCTA CGTGTCGTCC GATATCGAGA ATGCGATCTA CAAGATCGAG
AAGAAGTAG
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| Protein sequence | MKGKLALGAS ALTIGLLTLS VAHADGYQVT KLVPGSAFHG VHGLAVDKAG KLFAGSVAGA
ALYEVDRAAG TAKIAVPTPE GMADDIAIAP DGTMAWTAFL TGDLYARKGD GPIKKLASGL
PGINSLAFRK DGRLYATQVF LGDALYEIDV EGAKPPRKIM EKMGGLNGFE FGPDDKLYGP
LWFKGQIVKV DVDKGELSIV ADGFKVPAAA NFDSKGNLWA LDTALGQLVK IDPKTGAKQV
AAQLKPALDN LAIDASDRIF VSNMADNGIQ EVDPATGAAK QVIIGKLAFP GGIGVVSDGG
KDTIYIADVF AYRTVDGASG EVREVARMHA DGTTLEYPMS ATAKGDEVIL SSWFTGTVQT
IDRKTGQSRD MLHGFKAPYD AIRLGGGKLL VAELGTKSLV EVSGEHGKDR KAIATDLAGP
VGLVLGKDSA VYVSEAFAGQ ISKIDPVTGA KTVVAKDLKM PEGIALAPSG KLIVAEVGAK
RVVEVDPASG SVTEIAGNLP IGLVGAPGLP PTNMPTGVGV GAGGTIYVSS DIENAIYKIE
KK
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