Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4916 |
Symbol | |
ID | 6412602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5285539 |
End bp | 5286684 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714793 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_001993880 |
Protein GI | 192293275 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.866851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTGC CGGCGCTCAA GCCCATCCTG CTGCAGCTCC ATTCCGTCGC CGGATTGGTG CTCGCGGCGG TGCTGGTGCT GGTGGCGCTG ACCGGCGCAG TGATGAGTTT CGAGGATGAG ATCCGCGGCG CATTGGATGC CGGCCGGGTC CAGCTCGCAC CGCACGCCGG ATCGAGAATG CCGCTGGATC CGCTGATCGC GAAACTGCAG GCCGGCGGCG ATCCGGTCGC GTCGATCACG ATGCCGCGCA GCGCGGCCTC CGCGGCCGAG GTTCGGTTCG CACGCAAGCC GGATCACACC CGGCCGGCCC CGCTCTATCT CGATCCCTAC ACCGGCGAAA GCCTCGGTCA TCCGGCCGCC GACGCGTTCT TTTCGACCGT CCGCAAGCTG CACCGCTGGC TGCTGCTGCC GGGCGACGGC AGCGGTTACG GCCGGACCAT CACCGGCGTT GCCGCGCTCG GATTGCTGGC CATGCTGCTG ACCGGGCTGG TGCTGCGATG GCCGCATCGT CCCGGCAGCA TCAAGGTCTG GCTGAAACCG CACTGGCAGT TGCACGGACG CGGGCTGCAC CGATCGCTGC ACGCCGTCAT CGGAACCTGG GTGTTGCTGC TCTATTTGAT GATGACGCTG ACCGGTCTTT GGTGGTCGTT CGACTGGTAC AAGACCGCCG CAACCTGGCT TCTGGCACGA TCGCCTGTCA CGACGCAGCC TCCGAACCGT GCTGCCGTCA CTGCGGCGCC GTCCGCCGCA ATTTCGCTGG ATCGCGTCTG GGCGACACTC GTGGCCGAGC GTGGCGACAG GTTCGAGGCC GCACGCCTGA CGCTGCCGTC AGGCCGCGAC GGCACCGTGC GGGTCCGCGC CTGGCTGACC GATGCCCGAG ACGGCGCGCA TGACGAATTC CGGATCGACG GTCGGAGCGG CCAAATCCTG TCCGCCGACA TCTATGCCGA CAAGACGATC GGCGAAAAGG TATTGGCGCG CGTGCTCGAC ATCCACCGCG GCAGCATTTT CGGCTGGCCC GGTCAGTTGC TGTTCATGCT GGCGGCGGCG GCGATGCCAT TGTTCGGGGT GACCGGCGTT CTGCTGTATC TGTCGCGCCG CCGGCACAAG CGGATGCAGC GTGCCGCTCG CGCCAAGGTC GGCTGA
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Protein sequence | MRVPALKPIL LQLHSVAGLV LAAVLVLVAL TGAVMSFEDE IRGALDAGRV QLAPHAGSRM PLDPLIAKLQ AGGDPVASIT MPRSAASAAE VRFARKPDHT RPAPLYLDPY TGESLGHPAA DAFFSTVRKL HRWLLLPGDG SGYGRTITGV AALGLLAMLL TGLVLRWPHR PGSIKVWLKP HWQLHGRGLH RSLHAVIGTW VLLLYLMMTL TGLWWSFDWY KTAATWLLAR SPVTTQPPNR AAVTAAPSAA ISLDRVWATL VAERGDRFEA ARLTLPSGRD GTVRVRAWLT DARDGAHDEF RIDGRSGQIL SADIYADKTI GEKVLARVLD IHRGSIFGWP GQLLFMLAAA AMPLFGVTGV LLYLSRRRHK RMQRAARAKV G
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