Gene Rpal_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4916 
Symbol 
ID6412602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5285539 
End bp5286684 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID642714793 
ProductPepSY-associated TM helix domain protein 
Protein accessionYP_001993880 
Protein GI192293275 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.866851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTGC CGGCGCTCAA GCCCATCCTG CTGCAGCTCC ATTCCGTCGC CGGATTGGTG 
CTCGCGGCGG TGCTGGTGCT GGTGGCGCTG ACCGGCGCAG TGATGAGTTT CGAGGATGAG
ATCCGCGGCG CATTGGATGC CGGCCGGGTC CAGCTCGCAC CGCACGCCGG ATCGAGAATG
CCGCTGGATC CGCTGATCGC GAAACTGCAG GCCGGCGGCG ATCCGGTCGC GTCGATCACG
ATGCCGCGCA GCGCGGCCTC CGCGGCCGAG GTTCGGTTCG CACGCAAGCC GGATCACACC
CGGCCGGCCC CGCTCTATCT CGATCCCTAC ACCGGCGAAA GCCTCGGTCA TCCGGCCGCC
GACGCGTTCT TTTCGACCGT CCGCAAGCTG CACCGCTGGC TGCTGCTGCC GGGCGACGGC
AGCGGTTACG GCCGGACCAT CACCGGCGTT GCCGCGCTCG GATTGCTGGC CATGCTGCTG
ACCGGGCTGG TGCTGCGATG GCCGCATCGT CCCGGCAGCA TCAAGGTCTG GCTGAAACCG
CACTGGCAGT TGCACGGACG CGGGCTGCAC CGATCGCTGC ACGCCGTCAT CGGAACCTGG
GTGTTGCTGC TCTATTTGAT GATGACGCTG ACCGGTCTTT GGTGGTCGTT CGACTGGTAC
AAGACCGCCG CAACCTGGCT TCTGGCACGA TCGCCTGTCA CGACGCAGCC TCCGAACCGT
GCTGCCGTCA CTGCGGCGCC GTCCGCCGCA ATTTCGCTGG ATCGCGTCTG GGCGACACTC
GTGGCCGAGC GTGGCGACAG GTTCGAGGCC GCACGCCTGA CGCTGCCGTC AGGCCGCGAC
GGCACCGTGC GGGTCCGCGC CTGGCTGACC GATGCCCGAG ACGGCGCGCA TGACGAATTC
CGGATCGACG GTCGGAGCGG CCAAATCCTG TCCGCCGACA TCTATGCCGA CAAGACGATC
GGCGAAAAGG TATTGGCGCG CGTGCTCGAC ATCCACCGCG GCAGCATTTT CGGCTGGCCC
GGTCAGTTGC TGTTCATGCT GGCGGCGGCG GCGATGCCAT TGTTCGGGGT GACCGGCGTT
CTGCTGTATC TGTCGCGCCG CCGGCACAAG CGGATGCAGC GTGCCGCTCG CGCCAAGGTC
GGCTGA
 
Protein sequence
MRVPALKPIL LQLHSVAGLV LAAVLVLVAL TGAVMSFEDE IRGALDAGRV QLAPHAGSRM 
PLDPLIAKLQ AGGDPVASIT MPRSAASAAE VRFARKPDHT RPAPLYLDPY TGESLGHPAA
DAFFSTVRKL HRWLLLPGDG SGYGRTITGV AALGLLAMLL TGLVLRWPHR PGSIKVWLKP
HWQLHGRGLH RSLHAVIGTW VLLLYLMMTL TGLWWSFDWY KTAATWLLAR SPVTTQPPNR
AAVTAAPSAA ISLDRVWATL VAERGDRFEA ARLTLPSGRD GTVRVRAWLT DARDGAHDEF
RIDGRSGQIL SADIYADKTI GEKVLARVLD IHRGSIFGWP GQLLFMLAAA AMPLFGVTGV
LLYLSRRRHK RMQRAARAKV G