| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4912 |
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| Symbol | |
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| ID | 6412598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5282687 |
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| End bp | 5283529 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714789 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001993876 |
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| Protein GI | 192293271 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.29443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG TTCGTTATGG TGCTATCGGC CACGAGAAGC CTGGTCTGAT CGATAAAGAC
GGCCAGCTTC GCGATCTGTC CGGACAGATC GCCGACCTCG CAGGCGACGC GTTTTCGCCC
GCAGGCCTCG CCAAACTCGG TGCGCTCGAT GTCGCCGGAC TGCCTGCCGT GCCCGGCCAT
CCGCGGCTGG GCTCGCCGGT CGGCGGAGCG CCGAAGTTCA TCGCGATCGG CCTGAACTAC
GCCGACCACG CCGCCGAGGC CAACATGCCG ATCCCGGCCG AACCGATCGT GTTCATGAAG
GCGATCAACT CGCTGTGCGG ACCTAACGAC GATGTCGAGA AGCCGCGCGG CTCGACCAAG
CTCGATTGGG AAGTCGAACT TGCGGTGATC ATCGGCACCC GTGCCAAATA TGTCACCGAG
GCCGATGCGC TGAACTACGT CGCCGGCTAC GCGGTGTGCA ACGACGTCTC CGAGCGCAAC
TTCCAGCTCG AGCGGGTCGG GCAGTGGACC AAGGGCAAGT CGCACGACAC CTTCGGCCCG
CTCGGTCCGT GGGTCGCCAC CAAGGACGAG ATCGCCGATG TCCACAAGCT GGGGATGTGG
CTCGACGTCA ACGGCCAGCG CCGTCAGACC GGCTCGACCG CAACGATGAT TTTCAACGTG
CCGAAGATCG TGTCGTATCT GTCGGAGCTG ATGACGCTGA TGCCCGGCGA CATCATCACC
ACCGGCACGC CGCCCGGCGT CGGCACCGGG ATGAAGCCGC CTCAGTATCT CAACGTCGGC
GACGTCGTCA CCCTCGGGAT CGAGGGGCTC GGCGAGCAGA AACAAACCAT CGTGGCGGCG
TAA
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| Protein sequence | MKLVRYGAIG HEKPGLIDKD GQLRDLSGQI ADLAGDAFSP AGLAKLGALD VAGLPAVPGH
PRLGSPVGGA PKFIAIGLNY ADHAAEANMP IPAEPIVFMK AINSLCGPND DVEKPRGSTK
LDWEVELAVI IGTRAKYVTE ADALNYVAGY AVCNDVSERN FQLERVGQWT KGKSHDTFGP
LGPWVATKDE IADVHKLGMW LDVNGQRRQT GSTATMIFNV PKIVSYLSEL MTLMPGDIIT
TGTPPGVGTG MKPPQYLNVG DVVTLGIEGL GEQKQTIVAA
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