Gene Rpal_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4899 
Symbol 
ID6412585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5266674 
End bp5267291 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID642714776 
Producthypothetical protein 
Protein accessionYP_001993863 
Protein GI192293258 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGATC TGCATTCCTA CCAGCCGGCG AAGGGCCACG GCCTCAAGCA CGACCCGTTC 
AACGCCATCA TTGCGCCGCG GCCGATCGGG TGGATTTCGT CCTGCGACGC CGAGGGCCGC
GTCAACCTCG CGCCCTACAG CTTCTTCAAC GCCTTCAACT ACCACCCGCC GCTGATCGGG
TTCTCCTCCA CCACCTGGAA GGACACCGTC GCCAACATCC AGCGCACCGG CGAGTTCGTC
TGGAATCTGG TGACGATGGA TCTGGCGCAG GCGATGAATG CCACCTCCGC CAGCGTGCCG
CACGAGGTCG ATGAGTTCTC GCTCGGCAAT CTGACCAAGC TCGACAGCGA GCTGGTGAAG
CCGCCGCGGG TCGCCGAGAG CCCGGTGTCG TTCGAATGCA AGCTGTCGGA AATCATCCGG
CTCAAGGGCG CCGATGGCGT CGAGGTCGAC GCCTGGCTGA CGATCGGCGA AGTTGTGATG
GTGCATATCG ACCAGCGCCT GATCGAGGAC GGCGTCTATC AAACGGCTGC GGCACGGCCG
ATCGTGCGCG CCGGCCGGCG CGGCGACTAT TTCGAGATCC GCCCCGACGC GATGTTCGAG
ATGGTGCGGC CCGCCTGA
 
Protein sequence
MTDLHSYQPA KGHGLKHDPF NAIIAPRPIG WISSCDAEGR VNLAPYSFFN AFNYHPPLIG 
FSSTTWKDTV ANIQRTGEFV WNLVTMDLAQ AMNATSASVP HEVDEFSLGN LTKLDSELVK
PPRVAESPVS FECKLSEIIR LKGADGVEVD AWLTIGEVVM VHIDQRLIED GVYQTAAARP
IVRAGRRGDY FEIRPDAMFE MVRPA