| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4896 |
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| Symbol | |
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| ID | 6412582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5264062 |
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| End bp | 5264859 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714773 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001993860 |
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| Protein GI | 192293255 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.302168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCTC TGACCCATCG CCAGTCTGAA ATCCTCAACC TCGCCCGCGC TTCGGGCCGG
GTGATGGTCG AGGATCTGGT GCGGCGCTTC GAAGTGTCGG CACAGACCAT CCGCAAGGAT
CTCAACGATC TATGCGACCA GCGCTCGCTG ACGCGGATCC ACGGCGGCGC GATCATCGCC
TCCGGCGTCG CCAACCTCGC TTATGAGGCG CGCCGCTTCG TCGCCGCCGA AGAAAAGAAG
GCGATCGGCG CAGCTGCAGC GGCGCAGATT CCCAACGGCT GCTCGCTGTT CATCAACATC
GGCACCACCA CCGAGGAGGT CGCCAGCGCG CTGTCGGCGC ATCAGGATCT GTTGGTGATC
ACCAACAATC TCAACGTCGC GATGCTGCTG TACCGGCATC CGCGGATCGA GGTGATCGTC
GCCGGCGGCA CCGTGCGGCG TGCCGATGGT GCGGTGATCG GCTCCACCGC CACCAGCCTG
ATCGGCCAGT TCAAGGTCGA TTACGCGATC ATCGGCGCTT CGGCGATCGA CGAAGAGGGC
GCGCTGCTCG ATTTCGATTA TCGCGAAGTC CAGGCCTCGC AGGCGATCAT CGCCAATGCC
CGCAGCGTGA TGCTGGTGGC GGATTCGACC AAGCTGGAGC GCAACGCGCC GGTGCGCATC
GCCCATCTCA GCCAGATCCA GACCTTCGTC ACCGACCGGG CGCTGCCGCC CTCGCTGCAG
GCGATCTGCG ATACGAATGG TATCGAGGTA ATCGAAGCCT GCGCGGCGAA ACCCGATCTC
GACGAGTCCG CGGCCTAA
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| Protein sequence | MTALTHRQSE ILNLARASGR VMVEDLVRRF EVSAQTIRKD LNDLCDQRSL TRIHGGAIIA
SGVANLAYEA RRFVAAEEKK AIGAAAAAQI PNGCSLFINI GTTTEEVASA LSAHQDLLVI
TNNLNVAMLL YRHPRIEVIV AGGTVRRADG AVIGSTATSL IGQFKVDYAI IGASAIDEEG
ALLDFDYREV QASQAIIANA RSVMLVADST KLERNAPVRI AHLSQIQTFV TDRALPPSLQ
AICDTNGIEV IEACAAKPDL DESAA
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