Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4863 |
Symbol | |
ID | 6412549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5227985 |
End bp | 5228953 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714740 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_001993827 |
Protein GI | 192293222 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.22731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGCT TTGCCGTAAT CCGCGACGAT ACGCCGACGG CCGCGATCCC GAAGGGCGCG GTGGTGGCGA TGGGCAATTT CGACGGCGTG CACCGCGGCC ATCGCGCCGT GATTGGCGCC TGCCTGGACA TGGCGCGGAC CAAGAAGGCG CCCGCTCTGG CGGTGACGTT CGAGCCGCAT CCGCGCAAGT TCTTCAGCCC CGACGTCCCG CAATTCCGGC TGACCGACGA GACCGCCAAG CTGCGGCTGC TGGCGGGGAC CGGGCTCGAC GGCGCGGTGA TCCTCAGCTT TGACGCCCGT CGTGCGTCCA CCACGGCGCA TGATTTCATC CAGCACGAGC TGATCGGCCG GCTCGGGGTG CAGGGCATCG CGATCGGCTA CGATTTCCAC TTCGGCAAGG GCCGCGGCGG CTCGCCGTCG ATGCTGGTCG CCGAAGCGCC GTCGCTCGGG ATCGAGGTCG ACGTCCAGCC GCATGTCGAT TTCGGCGACC ATCCGGTGTC GTCGAGCGCG ATCCGCAAGT GCCTGGAGGA GGGCCACATC GCAGCCGCCA CCGAGATGCT CGGTGGGCCG TGGTTCGTCA CCGGCGAGGT GATCCATGGC GACAAGCGCG GCCGCGACCT CGGCTACCCC ACCGCCAATA TCCGGCTCGA TCCGCAATGC AGCCTGAAGC ACGGCATCTA TGCGGTGCGG GTCGGCCGCG GCGGTAGGCA CTACGACGCG GTGGCGAATT TCGGCCGCCG CCCGACTTTC GACAACGGCG CGCCGCTGCT CGAAGTGTTC GTGTTCGATT TCAATGAGCC CCTATACGGC GAGACGCTCG ACGTCGCCTT CATCGCCTTC ATCCGCGACG AGGAGAAGTT CGAGAGCATC GAGGCGCTGA TCCGGCAAAT GGACGACGAC TCCGCCCGCG CCCGCGCGGC ACTCGCCGCC GACCACGGTG CGTTCCCCAA GCTCGGCGCG CTGCGATGA
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Protein sequence | MTGFAVIRDD TPTAAIPKGA VVAMGNFDGV HRGHRAVIGA CLDMARTKKA PALAVTFEPH PRKFFSPDVP QFRLTDETAK LRLLAGTGLD GAVILSFDAR RASTTAHDFI QHELIGRLGV QGIAIGYDFH FGKGRGGSPS MLVAEAPSLG IEVDVQPHVD FGDHPVSSSA IRKCLEEGHI AAATEMLGGP WFVTGEVIHG DKRGRDLGYP TANIRLDPQC SLKHGIYAVR VGRGGRHYDA VANFGRRPTF DNGAPLLEVF VFDFNEPLYG ETLDVAFIAF IRDEEKFESI EALIRQMDDD SARARAALAA DHGAFPKLGA LR
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