Gene Rpal_4853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4853 
Symbol 
ID6412539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5215112 
End bp5215663 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID642714730 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001993817 
Protein GI192293212 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACA TAAATTTCAA CGAGATGATC CGGCCGTCCG GCGACCGCTC CGCGGAACCG 
GCCGGCGCCG ATGCATGCCC GCCGCGCTGG GACATCATCG AACTGCTGTT CTTCGCCTAT
CGGGACTTCG TCGGCGACGC CGACCATGTG CTGGAGGCGT TCGGCTTCGG CCGCGCCCAT
CATCGCGTGG TGCATTTCGT CTGCCGCTAT CCCGGCCTGA CGGTGGCCGA TCTGCTCGAC
GTGTTGCGGA TCACCAAGCA GTCGCTCAGC CGCGTGCTGA AGCAGCTGCT CGACGAGGGC
TACATCGTGC AGAAGGCCGG CGACAGCGAC CGCCGCCAGC GCCTTCTTTT CGCCACCGCA
AAGGGCGAGG CGCTGGTGGA GAAACTGGCC CGGCTGCAGA CCGAGCGGAT CGATCGCGCG
TTGCGCGACC TCGCTCCCGG TGGCGCCGAG GCGGTCGCCA AATTCCTGCG CGCCATGATC
GATCGGGACG ATCCGGACAA GGTGCTCCAG ACCATCCTGC ACGGCGGCAC CACCGCAAAG
GACGTGACGT GA
 
Protein sequence
MADINFNEMI RPSGDRSAEP AGADACPPRW DIIELLFFAY RDFVGDADHV LEAFGFGRAH 
HRVVHFVCRY PGLTVADLLD VLRITKQSLS RVLKQLLDEG YIVQKAGDSD RRQRLLFATA
KGEALVEKLA RLQTERIDRA LRDLAPGGAE AVAKFLRAMI DRDDPDKVLQ TILHGGTTAK
DVT