Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4853 |
Symbol | |
ID | 6412539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5215112 |
End bp | 5215663 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714730 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001993817 |
Protein GI | 192293212 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA TAAATTTCAA CGAGATGATC CGGCCGTCCG GCGACCGCTC CGCGGAACCG GCCGGCGCCG ATGCATGCCC GCCGCGCTGG GACATCATCG AACTGCTGTT CTTCGCCTAT CGGGACTTCG TCGGCGACGC CGACCATGTG CTGGAGGCGT TCGGCTTCGG CCGCGCCCAT CATCGCGTGG TGCATTTCGT CTGCCGCTAT CCCGGCCTGA CGGTGGCCGA TCTGCTCGAC GTGTTGCGGA TCACCAAGCA GTCGCTCAGC CGCGTGCTGA AGCAGCTGCT CGACGAGGGC TACATCGTGC AGAAGGCCGG CGACAGCGAC CGCCGCCAGC GCCTTCTTTT CGCCACCGCA AAGGGCGAGG CGCTGGTGGA GAAACTGGCC CGGCTGCAGA CCGAGCGGAT CGATCGCGCG TTGCGCGACC TCGCTCCCGG TGGCGCCGAG GCGGTCGCCA AATTCCTGCG CGCCATGATC GATCGGGACG ATCCGGACAA GGTGCTCCAG ACCATCCTGC ACGGCGGCAC CACCGCAAAG GACGTGACGT GA
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Protein sequence | MADINFNEMI RPSGDRSAEP AGADACPPRW DIIELLFFAY RDFVGDADHV LEAFGFGRAH HRVVHFVCRY PGLTVADLLD VLRITKQSLS RVLKQLLDEG YIVQKAGDSD RRQRLLFATA KGEALVEKLA RLQTERIDRA LRDLAPGGAE AVAKFLRAMI DRDDPDKVLQ TILHGGTTAK DVT
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