| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4817 |
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| Symbol | |
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| ID | 6412503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5184169 |
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| End bp | 5184876 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714695 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001993782 |
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| Protein GI | 192293177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.821962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGGTG CACATGACTG GCTGATCGCA GCGGTGCTGC TCGATATGGA CGGCACGCTG
GTCGATACCG AGCGCCTGTA TCTGGAAAGC CTGACCGAGG TACTGAACGC GTTCGGCCTG
CCGGATGCGA TCGAGACCTG CGAGTCGATG GTCGGGCTGC CGGGGCCGGA GTGCCAGGCG
CTGCTGGTCG CACGCTACGG CGAAACGCTG CCACTGCGCG AGATCAATCG CGCGTTCGTC
GAGAAGCGCG ACGCCCGGTT CGCGCAAGGT CTGCCGGTGA AACCAGGCAC CTGCGAGCTG
CTCGACGCGC TGGACGATGC AGGCTGCCCG GTCGCGGTAG TGACGTCGTC GTCGCGCAAG
ACGGCCGACA TGCACCTGAC GCTCGCCGGC ATCCGCGCGC GGTTTGGCAC CATCCTGACC
CGCGACGACG TCGTTCACGG CAAACCCGCG CCGGATCTGT ATCTGCTCGC CGCCGACCGA
CTCGGCGTGC CGCCGGCACA TTGCGTCGCC GTGGAAGATT CCAGCGTCGG CGTCGCGTCG
GCCTTCACGG CCGGCGCCAT CACGCTGATG GTGCCGGACC TGCTGCAGCC CGACGCCGCC
ACACGGGGCA AATGCGCCGC GGTGCTGCCG GATCTCAACG CGGTGCGGAC GCTGCTCGGG
ATCCGCGGCC AGTTCGCGGC GCCAAACGCG GCCCTCGCAC CGCGTTGA
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| Protein sequence | MTGAHDWLIA AVLLDMDGTL VDTERLYLES LTEVLNAFGL PDAIETCESM VGLPGPECQA
LLVARYGETL PLREINRAFV EKRDARFAQG LPVKPGTCEL LDALDDAGCP VAVVTSSSRK
TADMHLTLAG IRARFGTILT RDDVVHGKPA PDLYLLAADR LGVPPAHCVA VEDSSVGVAS
AFTAGAITLM VPDLLQPDAA TRGKCAAVLP DLNAVRTLLG IRGQFAAPNA ALAPR
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