| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4800 |
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| Symbol | |
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| ID | 6412486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5167276 |
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| End bp | 5168415 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714678 |
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| Product | L-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001993765 |
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| Protein GI | 192293160 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.700364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA TCACCTGCAT CGAAGACCTC CGCCAAATCC ACAAGCGCCG AGTGCCGAAG
ATGTTCTTCG ACTACGTCGA CCACGGCTCA TATGCCGAGG AGACGCTGCG GGCGAATGTG
GATGACCTGA AGCGGATCAA GTTCCGCCAG CGCATCCTGG TCGACATCTC CAAGCGCGAT
CTCGCGACCA CCATTTTGGG CGACACCTAC GCGATGCCGC TGATCCTGGC GCCGGTCGGC
TCGACCGGGA TGCAGCATGC CGATGGCGAA ATCCACGCCT GCCGCGCCGC GCAGGCCGCC
GGCATCCCCT ACACCCTGTC GACGATGTCG ATCTGCTCGA TCGAGGACGT CGCGGCCAAT
GTCGAGAAGC CGTTCTGGTT TCAGCTCTAT GTGATGCGCG ACCGCGGCTT CGCCAAAGCC
CTGATCGAAC GCGCGATCGC CGCCAAGTGC AGCGCGCTGG TGCTCACGGT CGACCTGCAG
GTGATCGGCC AGCGCCATCA GGACATCAAG AACGGCATGA CGGTGCCGCC GCAGTTGTTC
AAGCTGAAGA ACGTCATCGA CATCGCCACC AAGCCGCGCT GGGTGAAGGG CATTCTCGGC
ACGCCGCGGC GCAATTTCGG CAACATCGCC GGCCACCTGC CCGGCTCCAA GGATCTGGAG
TCGGTGTCCG CCTGGGTGGC GTCGCAGTTC GACGCATCGC TGAACTGGCG CGACATCGAC
TGGATCCGCT CGATCTGGCC GGGCAAGCTG ATCATCAAGG GCATCCTCGA CGTCGAGGAC
GCGCGCGAGG CGGTGAAGGT CGGCGCCGAA GCGCTGGTGG TGTCGAACCA TGGCGGCCGC
CAGCTCGACG GCGCGCCGTC GTCGATCGAA GTGCTGCCGG AGATCGTCCA CACCGTCGGC
TCGCATATCG AAGTAATGTT CGACGGCGGC ATCCGCTCCG GCCAGGACGT GATGCGCGCG
CTCGCGCTCG GCGCCAAGAG CTGCATGATC GGCCGCGCCT ATATCTACGG CCTCGGCGCC
TATGGCGGCC CGGGCGTCGC CAAGGCGATC GACATCATCG GCAAAGAGCT GTCGACCACG
ATGGGCCTGT GCGGCGTCAA TTCGATCCAC GAGATCGACG AGAAGGTGCT GGCGGACTAA
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| Protein sequence | MKEITCIEDL RQIHKRRVPK MFFDYVDHGS YAEETLRANV DDLKRIKFRQ RILVDISKRD
LATTILGDTY AMPLILAPVG STGMQHADGE IHACRAAQAA GIPYTLSTMS ICSIEDVAAN
VEKPFWFQLY VMRDRGFAKA LIERAIAAKC SALVLTVDLQ VIGQRHQDIK NGMTVPPQLF
KLKNVIDIAT KPRWVKGILG TPRRNFGNIA GHLPGSKDLE SVSAWVASQF DASLNWRDID
WIRSIWPGKL IIKGILDVED AREAVKVGAE ALVVSNHGGR QLDGAPSSIE VLPEIVHTVG
SHIEVMFDGG IRSGQDVMRA LALGAKSCMI GRAYIYGLGA YGGPGVAKAI DIIGKELSTT
MGLCGVNSIH EIDEKVLAD
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