Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4760 |
Symbol | |
ID | 6412446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5126757 |
End bp | 5127929 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714639 |
Product | hypothetical protein |
Protein accession | YP_001993726 |
Protein GI | 192293121 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.636154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCCC GCTTTCTCCG CGACCGATCC GCCAACGTCG CCGTGATCTT CGCCATCGCG CTTATTCCCC TGCTGGGCGC CGTCGGCAGC GCGGTGGACT ACACGATCGC GTCCAATCAG CGGATGAAGA TGCAGACCGC ACTCGACTCT GCGGTGCTGG CCGGCGTGCT GGAGCCGACC GATGCGGCGA AGATCGCGCG GGCGAGCGCG GCCTTCACGG CGAACTTCCA GCCGAGCTGG TCGGCGGCGA CCGCGAGCTT CACGGTGAAC GGCGGCGAGC TGGGCGGCTC GGCGAACTCG ACGGTGCCGA CGCAGTTTCT CGGCGTGCTC GGCATCAAGA CGATGACCAT CGCGGCGCAG TCGGCGGCGG TGGCGACAGC GAAGCGCAAG GTGTGCATCC TGCTGACGGC TTCGCCGGAC GCTCAGGCGT TTCTGGTCAA TTCAGGCGCC AAGCTGACCG GGCCGACTTG TGAGATTCAC GTCGCCTCGA CAGCGGGCGT CGCCGGCATG ATCAATTCGG GCACGACGCT GGACGTCGGC AAGGTCTGCA TCAAGGGAAG CGCGACACAG AATGGCGGAC CTTACCCGGT GGTGTCGACC GGCTGTGCGG CGATCGCCAA TCCATTCGTC GGCGCCTTGC CGCCGGTGTC GGCACCGGGC TGCAGCTTCA CCAACCAGAC CTACAGCGCC GGCAACGTCA CGCTGTCGCC GGGCACCTAT TGCGGATCGA CCAATTTCAA CGGGTCGGGA ACGCTCACGC TCAGGCCGGG CCTGTACGTG ATCAAAAGCG GCGCGATGAT CTTCAACTCC GGCTGGACCG TGTCCGGCAC TGGCGTGACG TTCTATCTGG CCGACCAGAA CGCCACGCTC ACCTTCAACG GCAACGTCAC CGCCAAGCTG TCGGCGCCGA GCAGCGGCAG CTATGCGGAC ATCCTGATGT TCGAGCCGGA CGGGCTCAAC CGCACCAACC TGCCGATCAA CGGCACTGCC GGCAGCAGCT GGACCGGCAT GATGTACTTG CCGAGCCGCG ACGTCACCAT CAACTCGGTG TCGAATGTCG TCGCCGACTC GGTGACCATG GTGTTCGCCA CGCTGAACGC GACCAACTGG TCGATCCAAC CCAGCCCCTC CGCCCCCGCC GCCACCCTGA CCGGCGCCCG GCTGTCGCGA TAG
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Protein sequence | MTPRFLRDRS ANVAVIFAIA LIPLLGAVGS AVDYTIASNQ RMKMQTALDS AVLAGVLEPT DAAKIARASA AFTANFQPSW SAATASFTVN GGELGGSANS TVPTQFLGVL GIKTMTIAAQ SAAVATAKRK VCILLTASPD AQAFLVNSGA KLTGPTCEIH VASTAGVAGM INSGTTLDVG KVCIKGSATQ NGGPYPVVST GCAAIANPFV GALPPVSAPG CSFTNQTYSA GNVTLSPGTY CGSTNFNGSG TLTLRPGLYV IKSGAMIFNS GWTVSGTGVT FYLADQNATL TFNGNVTAKL SAPSSGSYAD ILMFEPDGLN RTNLPINGTA GSSWTGMMYL PSRDVTINSV SNVVADSVTM VFATLNATNW SIQPSPSAPA ATLTGARLSR
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