Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4746 |
Symbol | |
ID | 6412432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5111313 |
End bp | 5113004 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714625 |
Product | Long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001993712 |
Protein GI | 192293107 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGGA TCTGGCTCAA GCAATACCCG CCGGGAGTCC CGGCCGACAT CGACGTGACG CAGTATCCCT CGCTGGTCGA CCTGTTCGAG GAAAGCTTCC GTAAGTACGG CGACCGCAAG GCCTTCATCT GCATGGATAA GGCGATCACC TATCGCGAGC TCGACGAGAT GTCGGTCGCG CTGGGCGCCT ACCTGCAGGG CAAGGGTCTT CAGAAGGGCG CGCGCGTCGC GCTGATGATG CCGAACGTGC TGCAGTATCC GGTGGCGATC GCCGCGGTGT TGCGCGCCGG CTTCGCGGTC GTCAACGTCA ACCCGCTCTA CACACCGCGC GAGCTCGAGC ACCAGCTTAA GGATTCCGGC GCCGAAGCCA TCATCGTGCT GGAGAACTTC GCCCACACCG TCGAGCAGGT GATCGCCCGC ACCCCGGTCA AGCACATCAT CGTCGGCGCG ATGGGTGACA TGCTCGGCTT CAAGGGCGTG ATCGTCAATC TGGTGGTCCG CAAGGTGAAG AAGATGGTGC CGGCGTTTTC GCTTCCCGGC GCGGTCTCGT TCAACGACGC GGTCTCGGCC GGCCGCGGCC AGAAGTTCAC CAAGCCGGCG ATCGGTCCCG AGAGCGTCGC CTTCCTGCAA TACACCGGCG GCACGACCGG CGTCTCCAAG GGCGCGACGC TGCTCCACCG CAACGTGGTG GCGAACGTGC TGCAGAACGA CGCCTGGCTG CAGCCGGCGC TGGCCAAGCC GCCGCATGTC GACCAGCTGT TCATCGTCTG CGCGCTGCCG CTGTACCACA TCTTCGCGCT GACCGCGTGC TACCTGCTCG GCATGCGCGC CGGCGGCGTC AACCTGCTGA TCCCGAACCC GCGCGACATC CCGGGCTTCA TCAAGGAACT GATGAAGTAT CAGGTCAACA GCTTCCCGGC CGTCAACACG CTGTACAACG GCCTGCTGCA TGCGCCGGGC TTCGACAAGG TCGACTTCTC CAAGCTGAAG ATCTCCAACG GCGGCGGCAT GGCGGTGCAA CGTCCGGTCG CCGAAGCCTG GCTGAAGATG ACCGGCTGCC CGATTGCCGA AGGCTACGGC CTGTCCGAGA CCGCGCCGGT GCTGACCTGC AACCCGGCGA CCGTCAACGA GTTCAACGGC ACCATCGGGC TTCCGATGCC GTCGACCGAG CTCTCGATCC GCGACGAAGA AGGCAAGGAA GTGCCGTTCG GCACCGCGGG CGAGATCTGC GCCAAGGGTC CACAGGTGAT GTCGGGCTAC TGGAATCGTC CCGACGAGAC CGCGCTGGTG ATGACAGCCG ACGGCTTCTT CCGCACCGGC GATATCGGCG TGATGTCGCC GGACGGCTTC ACCAAGATCG TCGACCGCAA GAAAGATATG ATCCTGGTCT CCGGCTTCAA CGTCTATCCG AACGAGGTCG AGGAAGTGGT CGCCAGCCAT CCCGGCGTGC TGGAATGCGC GGTGATCGGC GTGCCGGACT CGCGCACCGG CGAAGCCGTC AAGGCGTTCG TGGTGAAGAA GGACCCGGAT GTCACCGCCG AGGACATCAT CAAGTTCTGC CACCACGAAC TGACCAACTA CAAAGTGCCG CGGCAGATCG AATTCCGCAC CACGCTGCCG AAGACCAATG TCGGCAAGAT CCTGCGCCGC GAACTGCGCG ACGAGAAGAA GAGCAACCAG GCGGCAGCGT AA
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Protein sequence | MERIWLKQYP PGVPADIDVT QYPSLVDLFE ESFRKYGDRK AFICMDKAIT YRELDEMSVA LGAYLQGKGL QKGARVALMM PNVLQYPVAI AAVLRAGFAV VNVNPLYTPR ELEHQLKDSG AEAIIVLENF AHTVEQVIAR TPVKHIIVGA MGDMLGFKGV IVNLVVRKVK KMVPAFSLPG AVSFNDAVSA GRGQKFTKPA IGPESVAFLQ YTGGTTGVSK GATLLHRNVV ANVLQNDAWL QPALAKPPHV DQLFIVCALP LYHIFALTAC YLLGMRAGGV NLLIPNPRDI PGFIKELMKY QVNSFPAVNT LYNGLLHAPG FDKVDFSKLK ISNGGGMAVQ RPVAEAWLKM TGCPIAEGYG LSETAPVLTC NPATVNEFNG TIGLPMPSTE LSIRDEEGKE VPFGTAGEIC AKGPQVMSGY WNRPDETALV MTADGFFRTG DIGVMSPDGF TKIVDRKKDM ILVSGFNVYP NEVEEVVASH PGVLECAVIG VPDSRTGEAV KAFVVKKDPD VTAEDIIKFC HHELTNYKVP RQIEFRTTLP KTNVGKILRR ELRDEKKSNQ AAA
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