| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4745 |
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| Symbol | |
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| ID | 6412431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5109590 |
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| End bp | 5111041 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714624 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001993711 |
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| Protein GI | 192293106 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTTTCA TCACTGCACA GCCTCGCCGC TCATCCTCGT TTTTGACCAT CGTCGTGGCA
GCGTTGTTGT CGCTGACCGT GCTGCCGCGC GTCGCGAACG CCGAAGCGCT GCTGTTGATC
GAGGCCGATA CCGGCAAGGT GCTGCAGGCC GACAATGCTA CCTACCCGTG GCATCCGGCG
TCCGTCACCA AGCTGATGAC GCTGTATGTG ACACTGCAGG CGGTGAAGCA GGGCCGCCTC
ACCCCGGACA CGCTGCTGAC GGTGTCGCCG ATCGCCTCGG CGCAATCGCC ATCGAAGATG
GGCTTCCGCG CCGGCACCCA GGTCACCGTC GACAACGCGC TGAAGATGAT GATGGTGAAG
TCGGCCAACG ACATGGCCGT GGTGTTGGCC GAAGGCGTCG GCGGTTCGAT CGACGGCTTC
TCGGCGATGA TGAACGATAC CGCGGCGCGG CTCGGGATGA CGCAGACCCA CTACGTCAAT
CCCAACGGCC TGCCCGCCGA CGAGCAGGTG ACCTCGGCGC GCGACCTCGC GATCCTCGCC
CGCGCCATCA TCCGCGACCT GCCCGAATAC GAATACTACG TCCACATTCC GGCGATCCGC
TTCGGCAAGC GGGTGACGCG GAACTTCAAC AAGCTGATCG GCCGCTATCC CGGCGCCGAC
GGATTCAAGA CCGGATTCAT CTGCGCCTCG GGCTACAACC TCGTGGCGAG CGCCACCCGT
AACGGTCGCC GTCTGATCGC CGTGGTGCTC GGCGCCAACT CCGGTCAGGA TCGCGCCGTG
AAGGCCGCGC AACTCTTGGA GCGCGGGTTC TCGACCAACA CGCTCGCTTG GCTGACGCCG
TCGCTCGGCA CCGTCGACAA TCTGGCACCG ATCGCCGCCG CTCCGCCGGA CCTGCGCGAC
GAGATGTGCG GACCGAAGCG CAAGCGCCCG GCCAGCGACG AAGACGAAAC CGTCGCCAAT
GCGCTGTCGG GCAATCCGGT GATGTCGATG TTCCAGCCGC CGGCGCTGCG GCCGGTCGAC
ATGGTCGCCG CCGAACCCGA ACCGACCCAG CCGGTGCTGG TCTATACCGG CCCGACCCGC
ACCGGTCCGG CGCTGATCGC GGCGGAGACC AGCGACGCCG AGCGGCAGGC CGTCAAGCCG
GCCAAGAAGA AGAAAGCCCG GGTCGCGAAG AAAAACGACA CCGCTTCAGA AGGTCAGGAA
GCCAGCGTCG ACCAGGCCGC GCCGAAGGGC ACGAAGCCGC GTACCGCGGT GATCGTCGAT
ACCAACAAGC CGGCTACCAA ACCGGCCGCT GGCGCCAAGC CCACTGCGGG CAAGCACACC
GGCGCCAAGC ACGCCACGGC GAAGCCAGAA GCGGCCGCCG ACAAGCCGGC TGCACCGACG
AAGCCGAAGC CGAAGGCCGC TGCGAAGCCG GCATCGAGCA GCGCGACCAG CGACGCCAAA
CCGAAATCCT GA
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| Protein sequence | MPFITAQPRR SSSFLTIVVA ALLSLTVLPR VANAEALLLI EADTGKVLQA DNATYPWHPA
SVTKLMTLYV TLQAVKQGRL TPDTLLTVSP IASAQSPSKM GFRAGTQVTV DNALKMMMVK
SANDMAVVLA EGVGGSIDGF SAMMNDTAAR LGMTQTHYVN PNGLPADEQV TSARDLAILA
RAIIRDLPEY EYYVHIPAIR FGKRVTRNFN KLIGRYPGAD GFKTGFICAS GYNLVASATR
NGRRLIAVVL GANSGQDRAV KAAQLLERGF STNTLAWLTP SLGTVDNLAP IAAAPPDLRD
EMCGPKRKRP ASDEDETVAN ALSGNPVMSM FQPPALRPVD MVAAEPEPTQ PVLVYTGPTR
TGPALIAAET SDAERQAVKP AKKKKARVAK KNDTASEGQE ASVDQAAPKG TKPRTAVIVD
TNKPATKPAA GAKPTAGKHT GAKHATAKPE AAADKPAAPT KPKPKAAAKP ASSSATSDAK
PKS
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