| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4726 |
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| Symbol | |
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| ID | 6412412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5087572 |
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| End bp | 5089098 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714605 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001993692 |
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| Protein GI | 192293087 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGAAC CAGCCCCACC GTCGACCGAA CTCCTTGCAC GCGATCGCCG GTTGCAGCAG
GGCATCGACG GGTACGGCGT CGGCACCTGG GAGCTCAATC TCGCCACCCA GGAATTGGCG
TGTTCGGCGA CCGCGCGGAA GCTGTTGGGC GTGCCAGCCG ACGCTTCCCT CACCTACGAC
ACCTTCATCT CCCTGGTCGA TCCGGACGAT CGGGAGCAAA TTGCCCTCGC ACTGCAGCAA
TCGATCGAGC ACGGCGACAA GATCGACGTG ATGTACCGGG TGGCGGAGAA AGACCGCCCC
AGCCATTGGC TGCGCGCCCG CGGCGGCGTC GTGCACGAGG ACGGTGCGTC CTATCTTTGC
GGGATCGTGC TCGACATCGA TCAGCAGAAG GTGCTCGAGC AGGAGCTGCG GCTGCAGCAG
GGTCAGCTCC GCTCGATCCT CGACACCGTG CCGGACGCGA TGATCCTGAT CGACGGTCGC
GGCATCATGC GGTTTTTCTC GCGCGCGGCG GAGCGGATGT TCGGCATGTC CGAGCGCGAA
GCGATCGGCC AGAACATCAG CGTGCTGATG CCGCGCCCCG ACGCCACCCG TCACGACAAC
TACATCGACC GCTATAACAA CACCGGCGAA CGCCACATCA TCGGCATCGG CCGCATCGTC
ACCGGCCGCC GCAAGGACGG CAGCACCTTC CCGATCCATC TGTCGATCGG CGAAATGGAA
TCCGGCGGCG AGCGTTACTT CACCGGCTTC ATCCGTGACC TCACCGAGTA TCAGCAGACC
CAGGCGCGGC TGCACGAGTT GCAGGCCGAA CTGGTCCACG TCTCGCGGCT GACCGCGATG
GGCGAAATGG CCTCGGCGCT GGCGCACGAA CTGAACCAGC CGCTGTCGGC AATCAGCAAC
TACATGAAGG GCTCGCGCCG GCTGCTCGCC GGCAGCACCG ATCCCAACAC GGTCAAGATC
GAAAGCGCGA TGGAGCGCGC CGCCGAGCAG GCGCTGCGCG CCGGCCAGAT CATCCGCCGG
CTGCGCGATT TCGTCGCGCG CGGCGAGTCC GAAAAGCGGG TTGAAAGCCT CGCCAAGCTG
ATCGAAGAAG CCGGCGCGCT CGGGCTGACC GGCGCCAGGG AACAAGGCGT CGTGCTGCGG
TTCAATCTGG ATCCAGCGCA CGACCTGGTG CTGGTCGATC GGGTGCAGAT TCAGCAGGTT
CTGGTCAATC TGTTCCGCAA TGCGCTGGAA GCGATGGCCA ATTCCGATAA GAAGGAGTTG
TCCGCCGGCA ATGCGCGCGT GGCGGACGAC ATGGTCGAGG TCACCGTATC GGACACCGGC
AGCGGTCTGC CGGAGCAGGT CAAAGCCAAG CTGTTTCAGA CGTTCTTCAC CACCAAAGAA
ACCGGAATGG GGGTCGGACT TTCGATCAGC CGTTCGATCA TCGAGGCGCA TGGCGGCCGG
ATGTGGGCAG ACACGAACAG CGCCGGCGGC GCGACGTTCC GCTTCACGCT GCCGCTGGCG
CCCGTCGGGG ATTTGACTGA TGCCTAA
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| Protein sequence | MTEPAPPSTE LLARDRRLQQ GIDGYGVGTW ELNLATQELA CSATARKLLG VPADASLTYD
TFISLVDPDD REQIALALQQ SIEHGDKIDV MYRVAEKDRP SHWLRARGGV VHEDGASYLC
GIVLDIDQQK VLEQELRLQQ GQLRSILDTV PDAMILIDGR GIMRFFSRAA ERMFGMSERE
AIGQNISVLM PRPDATRHDN YIDRYNNTGE RHIIGIGRIV TGRRKDGSTF PIHLSIGEME
SGGERYFTGF IRDLTEYQQT QARLHELQAE LVHVSRLTAM GEMASALAHE LNQPLSAISN
YMKGSRRLLA GSTDPNTVKI ESAMERAAEQ ALRAGQIIRR LRDFVARGES EKRVESLAKL
IEEAGALGLT GAREQGVVLR FNLDPAHDLV LVDRVQIQQV LVNLFRNALE AMANSDKKEL
SAGNARVADD MVEVTVSDTG SGLPEQVKAK LFQTFFTTKE TGMGVGLSIS RSIIEAHGGR
MWADTNSAGG ATFRFTLPLA PVGDLTDA
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