| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4665 |
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| Symbol | |
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| ID | 6412351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5023582 |
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| End bp | 5025498 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714544 |
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| Product | oligoendopeptidase, pepF/M3 family |
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| Protein accession | YP_001993631 |
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| Protein GI | 192293026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAT CTGCGACCTC ACGTACCGCG AAGACCTCTT CCCGCAAGTC CACCCCCGCC
AAGCCAGCAC CGCGCAAGGC TGCACCCAGC AAGGCGAAAG CGGCCAAGAC CGCGGCTGCG
GGACGGAAGG CTGCCGCCAA GCCGGCGAAG CTTCCTGAGT GGAATTTGAT GGATCTGTAT
CCGGCGATCG GCTCGCCGGA GGTCGCCGCC GATCTCGACC GGCTCGATGC CGAATGCGCC
TCGTTCGAAG CCGACTTCAA GGGGCGGTTG GCCGAAGAGA CCGCGAAGGA CGGTGGCGCG
CTGTGGCTCG CCGGCGCGGT CAAGCGCTAT GAAGCGATCG AGGATCTGGC CGGTCGGCTC
GGTTCCTATG CTGGGCTGGT GCACGCCGGC GACAGCGTCG ATCCGGTGAA GTCGAAATTC
TATGGCGACG TCTCCGAGCG CCTAACCGCC GCCTCGGTAC ATCTGCTGTT CTTCACCCTC
GAACTCAACC GCGTCGACGA TGCGGTGCTT GAGACCGCGA TGCAGACGCC GGAGCTCGGC
CACTACCGGC CGTGGATCGA GGATCTGCGC AAGGACAAGC CGTATCAGCT CGAAGACCGC
ATCGAGCAGC TGTTCCACGA GAAGTCCCAG ACCGGTTACG GCGCGTTCAA TCGCCTGTTC
GACCAGACCA TCTCGTCGCT GCGCTTCAGG GTTGGCGGCA AGGAATTGGC GATCGAGCCG
ACGCTGAACC TGATGCAGGA TCGTGCGCCG GCGAAACGCA AGGCCGCGGC CGAAGCCTTG
GCCAAGACCT TCAAGGCGAA TGAGCGCACC TTCGCGCTGA TCACCAACAC GCTCGCCAAA
GACAAGGAAA TCTCCGACCG TTGGCGAGGC TTTGAAGACG TCGCCGACAG CCGCCACCTC
GCCAACCGGG TCGAGCGCGA AGTGGTCGAC GCGCTGGTCG CCTCGGTGCG AGCGGCGTAT
CCGAAGCTGT CGCACCGCTA CTACAAGCTC AAGGCCAGTT GGTTCAAAAA GAAGAAGCTG
CCGTATTGGG ATCGCAATGC GCCGCTGCCG TTCGCGGCGA CCGGCTCGAT CGCCTGGCCG
GACGCGCGCA ATATGGTGCT GACCGCCTAC AAGGCGTTCT CGCCGGAGAT GGCGCAGATC
GCCGAGCGGT TCTTCACCGA TCGCTGGATC GATGCCCCGG TCCGGCCGGG CAAGGCGCCC
GGCGCGTTTT CGCATCCGAC CACGCCGTCG GCGCATCCCT ATGTGCTGAT GAACTATCAG
GGCAAGCCGC GGGACGTAAT GACGCTCGCC CACGAGCTCG GCCACGGCGT TCACCAGGTG
CTCGCCGCCA AGAACGGCGC GCTGATGGCG CCGACGCCGC TGACGCTGGC GGAGACTGCC
AGCGTGTTCG GCGAAATGCT CACCTTCCGC CGTCTGCTGA CCCAGACCAA GGACCGCAAG
CAGCGCCAGG CGCTGCTCGC CGGCAAGGTC GAGGACATGA TCAACACCGT GGTCCGGCAG
ATCGCTTTCT ATTCGTTCGA GCGCGCGGTC CACACCGAGC GCCGCAGTGG CGAGCTCACC
GCGCAGCGGA TCGGTGAGAT CTGGCTGTCG GTGCAGGGCG AGAGCCTCGG CCCGGCGATC
GAGATCAAGC CGGGCTACGA GAGCTTCTGG ATGTATATCC CGCACTTCAT CCATTCGCCG
TTCTACGTTT ACGCCTACGC GTTCGGCGAC TGCTTGGTGA ACTCGCTCTA TGCGGTCTAC
GAGCACGCCC AGGAAGGCTT CGCCGAGCGT TATCTGGCGA TGCTGGCGGC CGGCGGGACC
AAGCATTATT CGGAACTGCT GGCGCCGTTC GGGCTCGACG CCAAGAACCC GAGCTTCTGG
GACGGCGGCC TGTCAGTGAT CGCCGGCATG ATCGACGAGC TGGAGGCGAT GGGGTAG
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| Protein sequence | MAKSATSRTA KTSSRKSTPA KPAPRKAAPS KAKAAKTAAA GRKAAAKPAK LPEWNLMDLY
PAIGSPEVAA DLDRLDAECA SFEADFKGRL AEETAKDGGA LWLAGAVKRY EAIEDLAGRL
GSYAGLVHAG DSVDPVKSKF YGDVSERLTA ASVHLLFFTL ELNRVDDAVL ETAMQTPELG
HYRPWIEDLR KDKPYQLEDR IEQLFHEKSQ TGYGAFNRLF DQTISSLRFR VGGKELAIEP
TLNLMQDRAP AKRKAAAEAL AKTFKANERT FALITNTLAK DKEISDRWRG FEDVADSRHL
ANRVEREVVD ALVASVRAAY PKLSHRYYKL KASWFKKKKL PYWDRNAPLP FAATGSIAWP
DARNMVLTAY KAFSPEMAQI AERFFTDRWI DAPVRPGKAP GAFSHPTTPS AHPYVLMNYQ
GKPRDVMTLA HELGHGVHQV LAAKNGALMA PTPLTLAETA SVFGEMLTFR RLLTQTKDRK
QRQALLAGKV EDMINTVVRQ IAFYSFERAV HTERRSGELT AQRIGEIWLS VQGESLGPAI
EIKPGYESFW MYIPHFIHSP FYVYAYAFGD CLVNSLYAVY EHAQEGFAER YLAMLAAGGT
KHYSELLAPF GLDAKNPSFW DGGLSVIAGM IDELEAMG
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