Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4641 |
Symbol | |
ID | 6412327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5002793 |
End bp | 5003626 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642714520 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001993607 |
Protein GI | 192293002 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.750363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGG AAGCCGATGC GGGCCGCCTG CCGGTTGAAA CCATGAGGCC GCGGTTCGCG ATGATTCAGA ACGCCTTTGC GGGGCGACCG ATGCGGGCGG CGGTGGGTCT CACCGCATTC TTCGCGATCT GGCAGGCGAT CACGCAGCTC AATCTGGTCG ACGGCTTCCT GCTGCCCTCG CCGGTCGCGA TCGCCGAAGC GCTGTGGGAG CTCGCGCTCG ACGGCTCGCT GTGGGTGCAT CTCGGCGCCA GCCTGCAGCG CGTTGCGGTC GGCTTCCTGC TCGCCTGCGT CGTCGGGCTG ACGCTCGGCC TGATCTGCGG CTGGTGGCGG ACGGTGTCCG ACTACGTGCG GCCAGTGATC GAAGCGCTGC GGCCGATCCC GCCGCTGGCC TGGATCCCGA TCACCATCCT GTGGTTCGGG CTCGGCGACG CCGCCTCTTA CTTCCTGGTT TTCCTCGGCG CGGTGTTTCC GGTTTTCATC GCCACCTACA CGGCGATCCG CGGCCTCGAC CGCAACCAGA TGAACGCCGC GCTGTGCCTC GGCGCCAAGC CCTGGCAGCT GTTTACCGAC GTGCTGATCC CGGCCTCGCT GCCGATCATC CTGCCCGGCC TGCGCATCGC GCTCGGCGTC GGCTGGATGT GCGTGGTCAC CGCCGAGCTG ATCGCCGCCC AGACCGGTCT CGGCTACCTG ATCCAGCAGT CGCGCATGCT CTTCCAGATC AACAATGTCG TCGCCGGCAT GGTGACGATC GGTCTGATCG GCTTCGCGAT GTCCGCCATC CTTGAACGTA TCGAGCGGCG CGTGAACGCG TGGGCTCCTT CCGAGCGCAG CTGA
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Protein sequence | MEAEADAGRL PVETMRPRFA MIQNAFAGRP MRAAVGLTAF FAIWQAITQL NLVDGFLLPS PVAIAEALWE LALDGSLWVH LGASLQRVAV GFLLACVVGL TLGLICGWWR TVSDYVRPVI EALRPIPPLA WIPITILWFG LGDAASYFLV FLGAVFPVFI ATYTAIRGLD RNQMNAALCL GAKPWQLFTD VLIPASLPII LPGLRIALGV GWMCVVTAEL IAAQTGLGYL IQQSRMLFQI NNVVAGMVTI GLIGFAMSAI LERIERRVNA WAPSERS
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