Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4604 |
Symbol | |
ID | 6412288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4962954 |
End bp | 4963664 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714481 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_001993570 |
Protein GI | 192292965 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.982342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCTT CATTTGGTCG TCTTGCTCTC TGCGCCGCGG CCGCCGGGCT GCTCGCATGG TCCGCACTCG GACCGTCCCG GGCGGCCGAG GAGCCGGTCG TGATTCCACC GCCGCAACTC GACGCCAAGG AAGCCGGCGG CATTCAGACC GCGGTGTTCG CCGGCGGCTG CTTCTGGGGC GTGCAGGGCG TGTTCCAGCA CACGGCCGGC GTGGTGAATG CGTTGTCGGG GTATGCGGGC GGCAGCAAAG CAAGTGCGAG CTATCCGCTG GTTTCGACCG GGACCACCGG TCACGCCGAG GCAGTCGAGG TCAAATACGA TCCGAAGCGG ATCTCCTACG GCAAGCTGTT GCAGATCTAC TTCTCGGTCG CGCACGATCC GACGCAGCTC GATCGCCAGG GGCCCGACAC CGGGCCGCAA TATCGCTCGG CGATCTTCAC CACGAGCGAC GAGCAGAAGC GGATCGCCGA CGCCTATATC GCGCAGCTCG ACGCCGCCAA GGTGTTCGGC GCTCCGATCG CCACCAAGGT CGGCCCGCTG AAGGGGTTTT ATGCCGCGGA GGCCTACCAC CAGGACTACC TGACTCTGCA CCCCACTCAG CCCTATATTG CCTACAACGA CCTGCCGAAG ATCGAGGCCC TGAAGAAGCT GTTTCCGACG GAGTATCTCG ACAAGCCGAC GCTGGTGAGC AGCGTCAAGG CCACCAACTG A
|
Protein sequence | MRASFGRLAL CAAAAGLLAW SALGPSRAAE EPVVIPPPQL DAKEAGGIQT AVFAGGCFWG VQGVFQHTAG VVNALSGYAG GSKASASYPL VSTGTTGHAE AVEVKYDPKR ISYGKLLQIY FSVAHDPTQL DRQGPDTGPQ YRSAIFTTSD EQKRIADAYI AQLDAAKVFG APIATKVGPL KGFYAAEAYH QDYLTLHPTQ PYIAYNDLPK IEALKKLFPT EYLDKPTLVS SVKATN
|
| |