| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4590 |
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| Symbol | |
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| ID | 6412274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4947980 |
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| End bp | 4949230 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714470 |
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| Product | ABC transporter related |
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| Protein accession | YP_001993559 |
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| Protein GI | 192292954 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.10294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGATT TGGCGATCTC CATCCGCAAC CTGTCCAAGG TATACAAGAT CTACTCGCGC
CCGGCCGACA TCCTGGTGGA GATGTTGACG CGCGCTAAGC GGCATCGCGA ATTCTGGGCG
TTGCGGGACG TCTCCCTGGA CATCAAGCGG GGCGAGGTGG TCGGACTGAT CGGCCGCAAC
GGCGCCGGGA AGACCACCTT GCTGCGAGTG ATCGCAGGCA CGCTCGATGC AAATGCCGGC
GACATCCGCG TCAACGGCAA GGTGTCCGCC ATCATGGCGC TCGGCACCGG TTTCAACCTG
GACCTGACCG GGCGCGAGAA CATCCTGATC GGCGGGCTGG TCCAGGGACT GACCCACGAA
GAAGTCGACG CCAAGACCGA AGAGATCATC AGTTTCTCCG GCCTGCGCGA TTTCATCGAT
CAGCCATGCA AGACCTACTC GAGCGGCATG ATCGCCCGGC TGGCGTTTTC GGTGGCGTCG
AGCATCGAGC CCGACATCCT GATCGTCGAC GAAGCGCTCG CGACTGGCGA CATGGTGTTC
AACGTCAAGA GCTATGCCCG GATGCGGCGG ATCGCGCGCA GCGGCGCCAC CGTCCTTCTC
GTCACCCACA GCCTTCCACA GATTTACGAG CTGTGTGATC GTGCGGTGCT GATCGAAAAC
GGAGCCGTGG CGCTGGATGG AGAGCCGAGG ATCGTCGGAC AGGCCTACGA GGACCTGCTC
CACAAGGAAA TGGAAGCTGC GAATGCCGCA AACGCCGCCG CCACGCCGCC CACGGCGACG
ACCCCGCCGA TCGAACTGAA GGGGTTTGTC GTGGAAGCGA TCCAGTTTAT CGATCAGGCG
CGGCTTCCGG TCCGCGCCCT GACATCGGGA CAGGCGTATC AGCTGGTCAT TCGCGGCAAG
GCGGCGTCGG CGCTGCGATC TTTCAATCTA GGCTTCTCGA TCAGCACCAA TATGGGAACC
GCGATCTACA GCACCAGCAC CGCCGATCAC GGCGGACGTC TCGATCTCGC CGCCGGTGAG
CGGGCCGAAG CGAGGTTCGA CTTTCCCTGC GACCTTAGCG CCGGAAGCTA TTTTCTGACG
ATCGAAACCA GCGAGGGCGA CTCGCCGAGG AAAGTGTTCC CGCTCGGCGA TTCCCGGGAT
CCGTCGGTTG CGGAGATTTT CGAGGTCGCG AACGGGGAGA AATTATTCGC AGGACTGATC
GACCTTGGAA GCAAGCTGCT ACTGGACGAC AACGATTCTC AAGTGAGCTA G
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| Protein sequence | MSDLAISIRN LSKVYKIYSR PADILVEMLT RAKRHREFWA LRDVSLDIKR GEVVGLIGRN
GAGKTTLLRV IAGTLDANAG DIRVNGKVSA IMALGTGFNL DLTGRENILI GGLVQGLTHE
EVDAKTEEII SFSGLRDFID QPCKTYSSGM IARLAFSVAS SIEPDILIVD EALATGDMVF
NVKSYARMRR IARSGATVLL VTHSLPQIYE LCDRAVLIEN GAVALDGEPR IVGQAYEDLL
HKEMEAANAA NAAATPPTAT TPPIELKGFV VEAIQFIDQA RLPVRALTSG QAYQLVIRGK
AASALRSFNL GFSISTNMGT AIYSTSTADH GGRLDLAAGE RAEARFDFPC DLSAGSYFLT
IETSEGDSPR KVFPLGDSRD PSVAEIFEVA NGEKLFAGLI DLGSKLLLDD NDSQVS
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