Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4588 |
Symbol | |
ID | 6412272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4945721 |
End bp | 4947094 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714468 |
Product | Methyltransferase type 12 |
Protein accession | YP_001993557 |
Protein GI | 192292952 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.28526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATGC ACACCCGAGC CCACGAGATC ACGTCGGCCA CGCAGGTGCT GACCTGCCCC GCGTGCGGCA ATGACACTCT CGCCGTGACC GACGAGTCGG TGAATCTCGA CCAGATCATG AAGCGCTGGC GCGATCACGG CGCGGCGTTC AGCGCCGAGA CACTCGCCCG CTACAGCACC CGCGAACTCG GGCCGCTCCA CCTCTACACC TGCCGGACCT GCCAGTTCGG ACAATATCAG CCGATCGTCG TCGGCAACGC CGATTTCTAC GGCGCGATTG GCCAGATCGA ATACTACACC GAGAACAAGT GGGAGTTCGA CCGCTCGATC GAATTCATCC GTCGCGAACG ACCGCACACG GTAATCGATG TCGGCTGCGG ATCCGGCTTC TTTCTCGATC AGTTGCGCAA GGCGATGCCC TCGATCAAGC TCGTCGGCAT CGAAATCAAC GAGGCCGCCG CCAGTCAGGC GCGCGCGCGC GGCCACCACG TGGAAGTGCT CGACTGGGAC CGGGAAGACT TCGCCCAAGC TCTGCCGTTC AAGGCCGACG TCGTGGTCTG CCATCAGGTC CTCGAGCACG TGCAAAATCC GATTCAGTTA CTGAAATCGA TCCGCACCAT GCTGACCGAA AGCGGCCTGG CGGTGATCTC GACGCCCGAC AGCGAAGGCT TGGTCGGCAG GCAGAGCGAT TCACTGACGG AACAGCCGCC CCATCACGTC ACGAAATGGA ACGAGGCGGC GTTCCGCGCC GCCCTGCCCC GCGCCGGGTT TCGCGCCGTC CGCGCCTATT ACGAGCCATT GCCGAAGATC CTGTGGCCCG GCTATTTTCC GACGATCTGG CAGGCGAACG GATGGCCGTC GATCGTCGGA CGCGCTGCGG CACAGGCCGG CAACCTCGGC GGCGAGGGCA TGAATTGGCT GGCTAGCCTG TTGGAACAAC GGGGGATTTC GTATCTTCAT GGCGCCGGCG GCCACACCAT CCTGGTCACC GCGCGGCCGC AAGCCAGCCA ACGGATCGCC GCGACAGGAC GCGACGCTTC CGAACAGCCC ACGCCATCGA GCTCGCTGCC AAGCTTGGTC GGCGAGCTTG TCGCGAAGAT CAAGGCGCGG CGGGCGGCGG CGCGGTTGCG TCACCTGCAG AGATCCGCGC AAGCATTGGT CGAGTCGGTC GATGCTTTCA TCGCAGAAGC TCAGTCGTTG ACCGCCGGTC AGGCTCCCGA GTCCGACCAT CAAGCGGGCC CGGCCGTGCG GCAGACCACC TTGGACGCAC TGGCGCAAAT CGCTTTGGAG ATCAACGAGC GTTACGAACG GCTCGACGCC CTCGAACGGT CTGCGCTTTC CGACGAGCAG CCGCGCGCGA GGCTGCGCCG ATGA
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Protein sequence | MIMHTRAHEI TSATQVLTCP ACGNDTLAVT DESVNLDQIM KRWRDHGAAF SAETLARYST RELGPLHLYT CRTCQFGQYQ PIVVGNADFY GAIGQIEYYT ENKWEFDRSI EFIRRERPHT VIDVGCGSGF FLDQLRKAMP SIKLVGIEIN EAAASQARAR GHHVEVLDWD REDFAQALPF KADVVVCHQV LEHVQNPIQL LKSIRTMLTE SGLAVISTPD SEGLVGRQSD SLTEQPPHHV TKWNEAAFRA ALPRAGFRAV RAYYEPLPKI LWPGYFPTIW QANGWPSIVG RAAAQAGNLG GEGMNWLASL LEQRGISYLH GAGGHTILVT ARPQASQRIA ATGRDASEQP TPSSSLPSLV GELVAKIKAR RAAARLRHLQ RSAQALVESV DAFIAEAQSL TAGQAPESDH QAGPAVRQTT LDALAQIALE INERYERLDA LERSALSDEQ PRARLRR
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