Gene Rpal_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4588 
Symbol 
ID6412272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4945721 
End bp4947094 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content64% 
IMG OID642714468 
ProductMethyltransferase type 12 
Protein accessionYP_001993557 
Protein GI192292952 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.28526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGC ACACCCGAGC CCACGAGATC ACGTCGGCCA CGCAGGTGCT GACCTGCCCC 
GCGTGCGGCA ATGACACTCT CGCCGTGACC GACGAGTCGG TGAATCTCGA CCAGATCATG
AAGCGCTGGC GCGATCACGG CGCGGCGTTC AGCGCCGAGA CACTCGCCCG CTACAGCACC
CGCGAACTCG GGCCGCTCCA CCTCTACACC TGCCGGACCT GCCAGTTCGG ACAATATCAG
CCGATCGTCG TCGGCAACGC CGATTTCTAC GGCGCGATTG GCCAGATCGA ATACTACACC
GAGAACAAGT GGGAGTTCGA CCGCTCGATC GAATTCATCC GTCGCGAACG ACCGCACACG
GTAATCGATG TCGGCTGCGG ATCCGGCTTC TTTCTCGATC AGTTGCGCAA GGCGATGCCC
TCGATCAAGC TCGTCGGCAT CGAAATCAAC GAGGCCGCCG CCAGTCAGGC GCGCGCGCGC
GGCCACCACG TGGAAGTGCT CGACTGGGAC CGGGAAGACT TCGCCCAAGC TCTGCCGTTC
AAGGCCGACG TCGTGGTCTG CCATCAGGTC CTCGAGCACG TGCAAAATCC GATTCAGTTA
CTGAAATCGA TCCGCACCAT GCTGACCGAA AGCGGCCTGG CGGTGATCTC GACGCCCGAC
AGCGAAGGCT TGGTCGGCAG GCAGAGCGAT TCACTGACGG AACAGCCGCC CCATCACGTC
ACGAAATGGA ACGAGGCGGC GTTCCGCGCC GCCCTGCCCC GCGCCGGGTT TCGCGCCGTC
CGCGCCTATT ACGAGCCATT GCCGAAGATC CTGTGGCCCG GCTATTTTCC GACGATCTGG
CAGGCGAACG GATGGCCGTC GATCGTCGGA CGCGCTGCGG CACAGGCCGG CAACCTCGGC
GGCGAGGGCA TGAATTGGCT GGCTAGCCTG TTGGAACAAC GGGGGATTTC GTATCTTCAT
GGCGCCGGCG GCCACACCAT CCTGGTCACC GCGCGGCCGC AAGCCAGCCA ACGGATCGCC
GCGACAGGAC GCGACGCTTC CGAACAGCCC ACGCCATCGA GCTCGCTGCC AAGCTTGGTC
GGCGAGCTTG TCGCGAAGAT CAAGGCGCGG CGGGCGGCGG CGCGGTTGCG TCACCTGCAG
AGATCCGCGC AAGCATTGGT CGAGTCGGTC GATGCTTTCA TCGCAGAAGC TCAGTCGTTG
ACCGCCGGTC AGGCTCCCGA GTCCGACCAT CAAGCGGGCC CGGCCGTGCG GCAGACCACC
TTGGACGCAC TGGCGCAAAT CGCTTTGGAG ATCAACGAGC GTTACGAACG GCTCGACGCC
CTCGAACGGT CTGCGCTTTC CGACGAGCAG CCGCGCGCGA GGCTGCGCCG ATGA
 
Protein sequence
MIMHTRAHEI TSATQVLTCP ACGNDTLAVT DESVNLDQIM KRWRDHGAAF SAETLARYST 
RELGPLHLYT CRTCQFGQYQ PIVVGNADFY GAIGQIEYYT ENKWEFDRSI EFIRRERPHT
VIDVGCGSGF FLDQLRKAMP SIKLVGIEIN EAAASQARAR GHHVEVLDWD REDFAQALPF
KADVVVCHQV LEHVQNPIQL LKSIRTMLTE SGLAVISTPD SEGLVGRQSD SLTEQPPHHV
TKWNEAAFRA ALPRAGFRAV RAYYEPLPKI LWPGYFPTIW QANGWPSIVG RAAAQAGNLG
GEGMNWLASL LEQRGISYLH GAGGHTILVT ARPQASQRIA ATGRDASEQP TPSSSLPSLV
GELVAKIKAR RAAARLRHLQ RSAQALVESV DAFIAEAQSL TAGQAPESDH QAGPAVRQTT
LDALAQIALE INERYERLDA LERSALSDEQ PRARLRR