Gene Rpal_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4578 
Symbol 
ID6412262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4933560 
End bp4934708 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID642714458 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001993547 
Protein GI192292942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00259669 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG ATGGTCAGTC GAAGCGGATC AAGGTAATGA CCATCGTCGG CACGCGTCCG 
GAGCTGATCA AGCTCAGCCG CGTGATCGCA GAGCTGGATC GGCATATGGA CCATGTCCTG 
GTCCATTCCG GCCAGAATTT CGACTACGAG CTCAACGAAG TGTTCTTTCA GGAACTCGGG 
ATCAGGCGCC CCGATATCTT CCTGAACGCC AACGCCGAGA CCGCGGCGCA AACGATCGGC 
AATGTGATCG TCAAGGCGGA CGAGGTGTTC GAACGCGAGC AGCCCAACGC GGTGCTGATC 
TACGGCGACA CCAATACCGG CCTCGCGGTG ATCCCCGCCA AGCGGCGCAA GATTCCCGTG 
TTCCACATGG AAGCAGGCAA TCGCTGTTTC GATCAGCGGG TGCCGGAGGA GGTCAACCGC 
AAGATCATTG ATCATTTGTC CGACATCAAC CTGCCTCTGA CTGAGCACGC GCGCCGCTAT 
TTGCTCGACG AGGGGCTGCC GCCGGATCGG GTGATCAAGA GCGGCTCTAC CATGACCGAG 
GTGTTGTCGT TCTACCGACC CGAGATCGAT GCGTCGCTGA TTCTGGACGA ACTTGGGCTG 
GCGCCGCGCG ACTATCTGCT GGTCAGCGTT CACCGCGAGG AGAATGTCGA CGATCCCGCC 
AAGCTCCGAC GGCTGCTCGC ATGCCTGCAG GCTTTGGCGG ACCATTTCGG CCGGCGGCTG 
ATCGTCTCGA CCCATCCGCG AACGCGCAAG CGGCTCAATG CGCTCACCGG TCACCACGAC 
GATGACCGGA TCGCGTTCCT TAAGCCGTTC GGATTCCTCA GTTACATCAA GCTGCAGATG 
AACGCATTTT GTGTGATCTC CGACAGCGGC ACGATCACCG AAGAGGCGTC GATTCTCGGT 
TTTCCAGCGG TGACGCTGCG GGAGGCGCAC GAGCGCCCGG AAGGAATGGA CCGGGCGACC 
CTGATCCTGA CCGGGCTCGA TCCAGAGCGC GTCGTGCAAT CGGTCAAGAT CGTCACCGAC 
CAGTTCGAGC CGGGCAAGCG GCCGACCGTC GTCGTCGACG ATTACGATGT GCCGGATGTC 
TCCCGCAAGA TGGTCCGCAT TATCGCCAGC TACATCGACT ATGTGAACCG GACGGTCTGG 
TCGAAATAG
 
Protein sequence
MSGDGQSKRI KVMTIVGTRP ELIKLSRVIA ELDRHMDHVL VHSGQNFDYE LNEVFFQELG 
IRRPDIFLNA NAETAAQTIG NVIVKADEVF EREQPNAVLI YGDTNTGLAV IPAKRRKIPV 
FHMEAGNRCF DQRVPEEVNR KIIDHLSDIN LPLTEHARRY LLDEGLPPDR VIKSGSTMTE 
VLSFYRPEID ASLILDELGL APRDYLLVSV HREENVDDPA KLRRLLACLQ ALADHFGRRL 
IVSTHPRTRK RLNALTGHHD DDRIAFLKPF GFLSYIKLQM NAFCVISDSG TITEEASILG 
FPAVTLREAH ERPEGMDRAT LILTGLDPER VVQSVKIVTD QFEPGKRPTV VVDDYDVPDV 
SRKMVRIIAS YIDYVNRTVW SK