Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4562 |
Symbol | purU |
ID | 6412246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4913456 |
End bp | 4914319 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642714442 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_001993531 |
Protein GI | 192292926 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.307485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTCATC ATCAGTATGT CCTGACTCTG TCGTGCCCGG ACCGCGCCGG GATCGTCTCC GCGGTGAGCA CGTTCCTATT CGAGAATGGT CAGAACATTC TCGACGCGCA GCAGTACAAC GATACCGAGA GCGGTCACTT CTTCATGCGG GTGGTGTTCA ACGCCGCCGC AAAGGTGATT CCGCTGGCGT CGTTGCGCAC CGGCTTCGGC GTCATCGCCG CCAAGTTCAC GATGGGCTGG CACATGCGGG ACCGGGAGAC CCGGCGCAAG GTGATGCTGC TGGTGTCGCA GTCCGATCAC TGCCTGGCGG ACATTCTTTA TCGTTGGCGG GTCGGCGACC TGCACATGAT CCCGACCGCG ATCGTGTCCA ACCACCCGCG CGAGACCTTC AGCGGGTTCG ATTTCGGCGA CATCCCATTC TACCACTTCC CGGTGAACAA GGACACGCGG CGGCAACAGG AAGCGGCGAT CACTGCGCTG ATCGCCCAGA CCCACACCGA TCTGGTGGTG CTGGCGCGCT ACATGCAGAT CCTGTCGGAC GAGATGTCAG CGCGGCTCGC CGGCCGCTGC ATCAACATCC ACCACTCGTT CCTGCCGGGC TTCAAGGGTG CGAAGCCGTA CCACCAGGCG TTCGACCGCG GCGTCAAGCT GATCGGCGCC ACCGCGCATT ACGTCACCAG CGCGCTCGAC GAAGGCCCGA TCATCGATCA GGACGTCGAA CGCATCAGCC ATCGCGACAC CCCGGCCGAT CTGGTGCGCA AGGGTCGCGA TATCGAGCGC CGGGTGCTGT CCCGGGCACT GCACTATCAC CTCGATGACC GGGTGATCCT CAACGGCCGC AAGACGGTGG TGTTCACCGA CTGA
|
Protein sequence | MPHHQYVLTL SCPDRAGIVS AVSTFLFENG QNILDAQQYN DTESGHFFMR VVFNAAAKVI PLASLRTGFG VIAAKFTMGW HMRDRETRRK VMLLVSQSDH CLADILYRWR VGDLHMIPTA IVSNHPRETF SGFDFGDIPF YHFPVNKDTR RQQEAAITAL IAQTHTDLVV LARYMQILSD EMSARLAGRC INIHHSFLPG FKGAKPYHQA FDRGVKLIGA TAHYVTSALD EGPIIDQDVE RISHRDTPAD LVRKGRDIER RVLSRALHYH LDDRVILNGR KTVVFTD
|
| |