Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4493 |
Symbol | |
ID | 6412177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4835820 |
End bp | 4836620 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642714375 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_001993464 |
Protein GI | 192292859 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTC CGATCGCACT CACCATCGCC GGCTCCGACT CCGGAGGCGG CGCCGGCATT CAGGCCGATC TCAAGTCGTT TTCCGCAAAC GGCGTCTATG GCGCCTCGGT GATCACCGCG CTGACCGCGC AGAACACCCG CGGCGTCACC GCGATCCACG ACGTGCCGGC CGCGTTCGTC ACCGCGCAGA TCGATGCGGT GTTCAGCGAT CTCGACGTCG CCGCCACCAA GATTGGAATG GTGGCGCAGC GCGGGGTGAT CGCCGCGATC GCCGAAGGGC TGGATCGCTG GCACGCCGCC AACGTCGTGC TCGATCCGGT GATGGTCGCA ACCTCGGGCG ATCGGTTGAT CGCCGACGAC TGCGTCGACG CGCTGCGCAC GGTGCTGATC CCGCGCGCCC GGATCATCAC GCCGAACCTG CCGGAAGCCG CCGCGCTGCT CGACGAGCCG GTCGCCGACG AGCCGGCAGA AATCGAACGC CAGGGCCGGC ATCTGCTCGC GCTCGGCTGC GAAGCGGTCC TGATCAAAGG GGGACACGGC ACCGGACCGA CCAGCACCGA TTACCTGTTC GTGGGAACCG AGGTGCAGGC GCTGTCCGCA CCGCGGATCG TCACCAACAA CACCCACGGT ACCGGCTGCT CGCTGTCCTC CGCGATCGCC GCCAATCTGG CGAAAGGCCA GTCGTTACAG GCCTCTGTGG CCGCCGCCAA ACAATGGGTC AGCGCCGCCA TCGCAGCTGC GGATCGGCTT TCGGTCGGGC ATGGCCACGG CCCGATCCAT CATTTCCACG GCTTCGACTA A
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Protein sequence | MAIPIALTIA GSDSGGGAGI QADLKSFSAN GVYGASVITA LTAQNTRGVT AIHDVPAAFV TAQIDAVFSD LDVAATKIGM VAQRGVIAAI AEGLDRWHAA NVVLDPVMVA TSGDRLIADD CVDALRTVLI PRARIITPNL PEAAALLDEP VADEPAEIER QGRHLLALGC EAVLIKGGHG TGPTSTDYLF VGTEVQALSA PRIVTNNTHG TGCSLSSAIA ANLAKGQSLQ ASVAAAKQWV SAAIAAADRL SVGHGHGPIH HFHGFD
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