| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4477 |
|---|
| Symbol | |
|---|
| ID | 6412161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4814883 |
|---|
| End bp | 4815203 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642714359 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001993448 |
|---|
| Protein GI | 192292843 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.431384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA TTAACTTCGT TGATCACACC GGTGAAACCC GCACTGTCGA AGTCGAGGAA
GGCGCGACGG TGATGGAAGC GGCGATCCGC AACGCCATCC CCGGCGTTGA AGCAGAGTGC
GGCGGTGCCT GCGCCTGCGC GACCTGCCAC GTCTATGTCG ACGAAGCCTG GCGTGAGAAG
GTCGGCGGCC CGTCGCCGAT GGAAGAAGAC ATGCTCGACT TCGGCTACGA CGTGCGCCCG
AACTCGCGGC TGTCGTGCCA GATCAAAGTC TCGAACGAAC TCGACGGGCT GATCGTCACC
ACCCCCGAAC GCCAAGCCTG A
|
|---|
| Protein sequence | MAKINFVDHT GETRTVEVEE GATVMEAAIR NAIPGVEAEC GGACACATCH VYVDEAWREK
VGGPSPMEED MLDFGYDVRP NSRLSCQIKV SNELDGLIVT TPERQA
|
|---|
| |