| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4387 |
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| Symbol | |
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| ID | 6412071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4715001 |
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| End bp | 4716458 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714269 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001993358 |
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| Protein GI | 192292753 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0766304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGCG CGATACTGAG GGCCGCGGCG ACCGCCGCCA GCCTGTTGTG CGGTGTGGCT
GCTGCGGCGG CGGAGAGCCG GGTCGCGCTG GTGATCGGGC AATCGGCTTA TCGGGCCGTG
CCGGCGCTGC CCAATCCGGT GAACGACGCC AAGGCGGTCG CCGCGCTGCT CGGTGAGGCC
GGTTTCGAGG TGACCGAGGC GTCCGATCTC GGCCAGACCG AGCTGCGCAC CAAGGTCGGC
GATTTCGCCG CCACGGTCGC GGCGAAAGGC CCAGAGACCG TCGCGCTGGT GTTCTATGCT
GGTCACGGCA TCCAGGTGGA TGGCGAGAAC TATCTGATCC CGGTCGACGT CGATCCGAAG
CGCGAGGCCG ATATTCCCCT GCAGGCGGTG CGTCTCGACG ACGTGCTCAA CACGCTCAGC
TCAGTGCCGA GCAAGAGCCG GATCATCATG CTGGATGCCT GCCGCAACAA TCCGTTTCCG
AGCATCAACA AGACCACAGG GCAGGGGCTG GCGTTGGTCG ATACCAAGTC CGGCGCGCCG
GGCACGCTGT TGTCGTACTC GACCTCGCCG GGCGCGGAAG CCGAGGACGG GGGCGGTACC
AACAGCCCTT ACACCACCGC GCTGCTCAAG GCCGGACGCG AGAACGGCCT GAAGATCGAA
GACACGCTCA AGCGGGTGCG GCTCGCGGTG CATCAGGCAA CCAAGGGACG GCAGACGCCG
TGGGAGAGCT CGTCGCTGGT CGACGACTTC CAGTTCTTCG CAGCATCCGC GGCAGCGCCG
ACCGACACCC CGGCGCCGAA GCCGCGCACG GTCGAGGAAT GGCGCAGCTT CCTGAAAGGC
AAGCCGGTGG ATCAGGCCAA CACGTTGATC GTCTCCGACG GTTCGGCCGA CGCTTATGAA
GCGTTTGTCG GGCTCTACGC CGAGCCGCCA TTCGCGCCCG AAGCCAAGCG CTGGCTCGAC
CGCCATCGCC GGATGAAGGC GTGGAGCCGG GCGGTGCTCG TCAACACAGG AACGGCCTAT
TCGGCATTCC TGACCGAATA TCCGGACAGC GACCTCACCG TGACCGCGCG CAAGCTCGCC
GAGCGGCTGC GCAATCGCCC CGACAACGCG GTGGTGGTGC CGGCCGCGCT CACGGCACCG
GTGGTTGCAG CCGCGGCGCC GACCTGCCCG TGCGGGCCGA CCGCTCCGTT GCTGCAGCAG
AAGGCTGAAC CGAAGAAGAG CGATGTGAAG AAGACCAAGA GCCGGGCCGA GCGCGACGAT
CCGCCCAAAC GCGGCGGCAA GGTCTCGCGG ACCCGGGTCT ATGTCGAGGA GGAGGACGAC
GTCGTGGTGG TGCGGCGACC GCCGATCTAC GGCGCCCCAC CGGGGCCGGT GATCCAGTTT
GGCGGCGGTT TCCGCGGCGG CTATGGCGGC CCGTATCGCG GCGGCGGCCA GACCGGACCG
AGCCGCGGGC GCTACTGA
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| Protein sequence | MRRAILRAAA TAASLLCGVA AAAAESRVAL VIGQSAYRAV PALPNPVNDA KAVAALLGEA
GFEVTEASDL GQTELRTKVG DFAATVAAKG PETVALVFYA GHGIQVDGEN YLIPVDVDPK
READIPLQAV RLDDVLNTLS SVPSKSRIIM LDACRNNPFP SINKTTGQGL ALVDTKSGAP
GTLLSYSTSP GAEAEDGGGT NSPYTTALLK AGRENGLKIE DTLKRVRLAV HQATKGRQTP
WESSSLVDDF QFFAASAAAP TDTPAPKPRT VEEWRSFLKG KPVDQANTLI VSDGSADAYE
AFVGLYAEPP FAPEAKRWLD RHRRMKAWSR AVLVNTGTAY SAFLTEYPDS DLTVTARKLA
ERLRNRPDNA VVVPAALTAP VVAAAAPTCP CGPTAPLLQQ KAEPKKSDVK KTKSRAERDD
PPKRGGKVSR TRVYVEEEDD VVVVRRPPIY GAPPGPVIQF GGGFRGGYGG PYRGGGQTGP
SRGRY
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