Gene Rpal_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4313 
Symbol 
ID6411997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4642944 
End bp4643660 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID642714195 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001993284 
Protein GI192292679 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCG CCTCAACTGC TCCTTCGGTT TCTGCTCCCG TCGCTGCGAA GCGGGCCGCC 
GCGGCCCGCG GCTCTGCGTC AGCGGCCAAG CCAGCCTCGG AAAACGAGGC GATCTCGACC 
CGCGCCGCCA AGGCGGCGGA ACGGCGCGCC GCGATCATCG AAGCGGCGCT CGACGAGTTC 
ACCGCGCGCG GCTTCGCGGC GACCCGGATC GATGACGTCG CCAAGCGTGC CGGCGTTGCC 
AAGGGCACGA TCTATCTGCA CTTCACCGAC AAAGAGGCGA TGTTTCAGGA GCTGGTGCGC 
ACCGCGCTGG TGCCGACGAT GCAGCGGCTG ACGGCGCAGC CGTCGCCCGG CGTATCGGCG 
CGGCAAATGC TCGAAGCCTT CGCCGACGCC TTCGTGAACG ATGTCGCGCA GACCCGGCGC 
GGCGACATTT TGCGGCTGGT GATGGCGGAG GGCACCCGGT TTCCGTCGCT GGCGGAATTC 
CACTACCGCA ACGTGGTCGA GCCCGGCGTC GCCGGCATCC GCCGCATCCT GGAGCTCGGC 
GTCGCCCGCG GCGAAATCAG TTCTGCGGCG CTGACGCAGT TTCCGCAACT CGCGGTCGCG 
CCGGTGGTGC TCTCGGTAAT CTGGCAGGGC CTGTTCGGCC GGTTCGCGCC GCTCGACGTC 
CAGGCGATGC TGCGCGCGCA TCTCGATCTG ATCTTCGGCG AAAGGACGGC GTCATGA
 
Protein sequence
MKRASTAPSV SAPVAAKRAA AARGSASAAK PASENEAIST RAAKAAERRA AIIEAALDEF 
TARGFAATRI DDVAKRAGVA KGTIYLHFTD KEAMFQELVR TALVPTMQRL TAQPSPGVSA 
RQMLEAFADA FVNDVAQTRR GDILRLVMAE GTRFPSLAEF HYRNVVEPGV AGIRRILELG 
VARGEISSAA LTQFPQLAVA PVVLSVIWQG LFGRFAPLDV QAMLRAHLDL IFGERTAS