Gene Rpal_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4298 
Symbol 
ID6411982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4626557 
End bp4627258 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID642714180 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001993269 
Protein GI192292664 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.530374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAC TGCGCATGAC CAGCGACTTG CGCCGGGAAT TGATCCTGGG CGCAGCCAAG 
CGTTGCTTTG CCCGGAATGG CTTTGCAGGG ACCACCACCA AGAGCGTCGC GGCCGCCGCG 
TCGATCTCGG AAGGGTTGCT GTTCAAGCAT TTCCCGAGCA AGGCGGCGCT GTATGCCGAG 
ATCCTGGCGT GCGAGCGTGA AGCCGATCCG GCCTTGATGG ACCTGCTCGG CGCCGAGCCC 
TCGACCCAGA CGCTGGTGGT GCTGGTGCGG GAGATGGTGG AGCACTTCCT GCATGCCTCC 
GATCAACCGG AGCAGGAGGA GGACCAGCGG CTGCGGCTGT TGGTCTCGAG CCAGCTCGAT 
GACGGCGAGT TTGCCCGTCT GGTGTACGAG AAGGTCGCCG GGCTGATCGG GCGGACCTTC 
GTGTCGTCGC TGGAGCGGGC GGTGGAAGCG GGCGACGCGG TGCGGATCGG CAACGAACCG 
ATGAACCTGT TCTGGTTCGC CCACCACACC TTGCTGATGG CGGCGCTGGC GCGGCTGCCG 
TCGGTGCCGT GCCTGAGCTA CGGCGACGCC GCGAGTCACG AGCGCCAGAT GTGTGAATTC 
ATTCTACGTG GAATTGGTCT GAACGAAGCC GTAATTGCCG CCCATCTCGA CCGCGAATTG 
TCGCCGGGCC GGATAAAGGC GGAAACGACA GAAAGTGCAT GA
 
Protein sequence
MTSLRMTSDL RRELILGAAK RCFARNGFAG TTTKSVAAAA SISEGLLFKH FPSKAALYAE 
ILACEREADP ALMDLLGAEP STQTLVVLVR EMVEHFLHAS DQPEQEEDQR LRLLVSSQLD 
DGEFARLVYE KVAGLIGRTF VSSLERAVEA GDAVRIGNEP MNLFWFAHHT LLMAALARLP 
SVPCLSYGDA ASHERQMCEF ILRGIGLNEA VIAAHLDREL SPGRIKAETT ESA