Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4285 |
Symbol | |
ID | 6411969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4613374 |
End bp | 4614462 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714167 |
Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
Protein accession | YP_001993256 |
Protein GI | 192292651 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.481656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACATCT CCGCCAGCAT TCCGCGATTT CATCCGCTGA CCATTGCCGA CCTGCGCCGC GAAGGGCGGG ATGCGATCTC GCTCAGCTTC ACGGTCCCGC CGGAGCTGGC GAGCGCCTAT CAGTTCGTGC CGGGCCAGTA TCTGACGCTG CGCACCACGA TGGACGGCGA GGAGGTGCGG CGGTCGTATT CGATCTGCTC CGGGCCCGAC GACGGCGAGC TGCGGATCGC GGTGAAGAAG GTCGATGGCG GCGCATTCTC GGTGTGGGCG ACCGAAGAGT TGAAAGCCGG CGATACCATC GAGGTGATGA CGCCGACCGG CCGGTTCGGT GCGCTGCATG CCGTGGAGGA GACGCGTACC TATGTGGGCT TCGCCGCCGG CAGCGGCATT ACGCCGATCC TATCACTGAT CAAAGGCGTG CTGGTGCGCG AGCCGGGCAG CCGGTTCTTC CTGTTCTACG GCAACCGCAC CACCGATCAG ATCCTGTTTC GCGAGTCTCT TGAGACGTTG AAGGACCGCT ACCTCGACCG GCTCGCGGTG TTTCATGTGC TGTCGCAGGA AGAACAGGAC GTGCCGGTGA TGCAGGGCCG GCTCGACCGC GACAAGGTGC GGCTGCTGCT GACCGCGATG GTGCCGGCGG CAAGCGTCGA TCACGTCTTC ATCTGCGGCC CGACCGGGAT GAGCGACGAC GTCGAGACCA CCTGCCGCGA CCTCGGCATC GCCGCAGAGC GCATCCATGT CGAGCGCTTC GTTTCAGGGC TTGGCGGCAA GCCGCGGCCG AAGGCGGTGG TCGAGCCGGG CGCGCCGCCG AAAGCGATGG CGTCGCTGAT CATTGACGGC AAGCGCCGCG AGGTGCCGGT CGCGGAAGGC GAAGCCATCC TCGATGCTGC GCTGCGCGCC GGCGTCGACC TGCCATTCGC CTGCAAAGGC GGGATGTGCT CGACCTGCCG CGCCAAGCTG GTCGAGGGCG AAGCCAAGAT GGACCTGAAC TACTCGCTGG AGCCCTGGGA ACTCGCCGCC GGCTTCGTGC TCACCTGTCA GGCGAAACCG ACCACCGATC GCGTGGTGGT GGATTACGAT CATCTGTGA
|
Protein sequence | MNISASIPRF HPLTIADLRR EGRDAISLSF TVPPELASAY QFVPGQYLTL RTTMDGEEVR RSYSICSGPD DGELRIAVKK VDGGAFSVWA TEELKAGDTI EVMTPTGRFG ALHAVEETRT YVGFAAGSGI TPILSLIKGV LVREPGSRFF LFYGNRTTDQ ILFRESLETL KDRYLDRLAV FHVLSQEEQD VPVMQGRLDR DKVRLLLTAM VPAASVDHVF ICGPTGMSDD VETTCRDLGI AAERIHVERF VSGLGGKPRP KAVVEPGAPP KAMASLIIDG KRREVPVAEG EAILDAALRA GVDLPFACKG GMCSTCRAKL VEGEAKMDLN YSLEPWELAA GFVLTCQAKP TTDRVVVDYD HL
|
| |