| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4283 |
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| Symbol | |
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| ID | 6411967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4610657 |
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| End bp | 4611529 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714165 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001993254 |
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| Protein GI | 192292649 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.399303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC CTCGCCTCGC CACCTTCACC GTCAACGGCC TCACCCGCTA CGGCGCGGTT
TGTGATCATG GGGTGGTCGA TCTGTCGGCC CGCCATGCCA ACGATTATCC GACCCTGCGC
GAGGTGATCG CCGCCGGCGC GCTGCAGCGG ATCGTCGACG AGGCCGACCA CACCGCACCG
GACTTCGCGC GCGACGCCGT GAAGCTTCAG CCGCCGATCC CGCAGCCGGA AAAGATCATC
TGTGTCGGCG TCAACTATCC GGACCGCAAC GCCGAATACA AGGACGGCAG CGAGGCACCG
AAGTTTCCGT CGATGTTCAT GCGCACGCCG CGCTCTTTCG TCGGCCACGG CACGCCGCTG
GTGCGGCCGA AGGCCTCGAA GCTGCTCGAC TACGAGGGCG AGCTGACACT GGTGATCGGC
CAGGGCGGCC GGCACATCGC CGAGGCCGAC GCACTGAATC ATGTCGCCGC GATCACCCTG
TGCAACGAGG GCACGATCCG CGACTGGGTG CGGCACGCCA AGTTCAACGT GACGCAAGGC
AAGAACTTCG ACCACACCGG CAGCCTGGGA CCGTGGCTGG TGCCCTACAC CGATGAATCT
CAGATCGCCG ACATCCGCCT CACCACGCGC GTCAACGGCG AGACGCGGCA GGACGACCGC
ACCTCGCGGA TGATCTTCAG CTTCCGCTAT CTGATCGCCT ACATCTCGAC CTTTACCACG
CTGGTGCCGG GCGATCTGAT CGTCACCGGC ACGCCGGCCG GCGCCGGCGC ACGCGCCGAA
CCGCCGGTGT ATCTGAAGCC CGGCGATATC ATCGAGGTCG AGGCCGACGG CATCGGCACC
TTGCGCAACG GCGTGATCGA CGAAGCCGAA TAA
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| Protein sequence | MPTPRLATFT VNGLTRYGAV CDHGVVDLSA RHANDYPTLR EVIAAGALQR IVDEADHTAP
DFARDAVKLQ PPIPQPEKII CVGVNYPDRN AEYKDGSEAP KFPSMFMRTP RSFVGHGTPL
VRPKASKLLD YEGELTLVIG QGGRHIAEAD ALNHVAAITL CNEGTIRDWV RHAKFNVTQG
KNFDHTGSLG PWLVPYTDES QIADIRLTTR VNGETRQDDR TSRMIFSFRY LIAYISTFTT
LVPGDLIVTG TPAGAGARAE PPVYLKPGDI IEVEADGIGT LRNGVIDEAE
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