| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4273 |
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| Symbol | |
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| ID | 6411957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4596676 |
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| End bp | 4597554 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714155 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_001993244 |
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| Protein GI | 192292639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.854777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCTACG ACATTCGCCA CGTCACGACC TATTCTTACG GCAGCCAGGT GAGTTTCGCC
CGCTGCTCGC TGCGGCTGAA GCCGATCTCA GAGCCCGGCC AGTCGCTGCT GTCGCATGCA
ATCGAGATCA AGCCGCGGCC GGCGGCCCGC ACCGCCCGCA CCGACTTCTT CGGCACGGTC
ACCGAGAGCA TCGTGATCGA GGCGCCGCAC AAGGTGCTGC GGATCGACAG CCGATCGCGG
GTCGAGGTGA CGCGGCAGCC GCCGCCGCGC GACTCCGGCA GCCAGCCCTG GGAGCCGGTC
CGCGATGCCG CGCTCACCAG CCCGAGCCTC GGCGCGTCCT CGCCGGTCGG CTACGTGTTT
GCCAGCCCGC TGGTGCCGAT CCTGCCAGCG GTGACCCGCT ACGCGGCGCA GAGTTTCCCG
CACGGCCGCG GCGTGCTCGC CGGCACCGCC GAGCTGATGC GGCGGATCCG CACCGAATTC
CGCTACGACC CCAAGGCGAC GGTGATTTCG ACTCCGCTGG CCGAAGTGTT CGAGAAGCGC
CACGGGGTTT GCCAGGACTT TGCGCATGTG ATGATCGCCG GCCTGCGCGG TCTTGGTCTG
CCGGCCGCCT ATGTCAGCGG TTATTTGCGG ACCTATCCGC CCGAGGGGCA GGAACGGCTA
CAGGGCGCCG ATGCGACCCA CGCCTGGGTC TCGGTGTGGT GCGGCAACGA ACTCGGCTGG
ATCGGCTTCG ACCCCACCAA TGACCTGCTG GTTGGGACCG ATCATATCGT CCTGGCGGTC
GGCCGGGATT TCTCGGACGT TTCTCCGGTC GACGGCGTCA TCGTCGGTTC CCGCCGGCAG
AAACTCTCGG TGGCGGTCGA CGTCATTCCG GTCGAGTAG
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| Protein sequence | MIYDIRHVTT YSYGSQVSFA RCSLRLKPIS EPGQSLLSHA IEIKPRPAAR TARTDFFGTV
TESIVIEAPH KVLRIDSRSR VEVTRQPPPR DSGSQPWEPV RDAALTSPSL GASSPVGYVF
ASPLVPILPA VTRYAAQSFP HGRGVLAGTA ELMRRIRTEF RYDPKATVIS TPLAEVFEKR
HGVCQDFAHV MIAGLRGLGL PAAYVSGYLR TYPPEGQERL QGADATHAWV SVWCGNELGW
IGFDPTNDLL VGTDHIVLAV GRDFSDVSPV DGVIVGSRRQ KLSVAVDVIP VE
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