Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4225 |
Symbol | |
ID | 6411909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4535169 |
End bp | 4535456 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642714107 |
Product | Excinuclease ABC C subunit domain protein |
Protein accession | YP_001993196 |
Protein GI | 192292591 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0073463 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTACT ACGTCTATCT CCTCGCCAGC GGAAAGCACG GAACGCTCTA TCTTGGCGTG ACCAACGATC TAGTACGCCG CGTGCATGAA CATCGCAGCA AGGCAGCGCC GGGATTCTCC GAGCGTTACA GCATCGATCG GCTGGTGTGG TTCGAGATCT ACAACGACGC TGTCACCGCG ATCACGCGGG AGAAGCAGCT CAAGAAGTGG CGGCGTGACT GGAAGATCAG GCTGATCGAG GAACAGAACC CGGACTGGTC CGATCTCTAT CCCGGAATTT GCAGTTAG
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Protein sequence | MPYYVYLLAS GKHGTLYLGV TNDLVRRVHE HRSKAAPGFS ERYSIDRLVW FEIYNDAVTA ITREKQLKKW RRDWKIRLIE EQNPDWSDLY PGICS
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