| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4196 |
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| Symbol | |
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| ID | 6411880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4499340 |
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| End bp | 4499873 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642714078 |
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| Product | TadE family protein |
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| Protein accession | YP_001993167 |
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| Protein GI | 192292562 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.394929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCCA TCGTTTCACC AGCGCGGGCA ATGGCTCGCA AATTTCGTCG GAACCGGAAG
GGCTCTGCGG CGGTCGAATT TGCGATCGTT GCCCCGATTT TTTTCGCGTT GTTGTTCGCG
ATCATTGAAG TGGCAATGAT CTTTTTCGCC AGCCAGGTAC TGGAGACCGC GGTTCAGGAT
TCGTCGCGGC TGATCTTTAC GCGGCAGGCG CAGGACGCCT CAATGACGCA GGACCAATTC
AAGACCGAGG TCTGTAAGCG TCTCATCTCT TTGTTCGACT GCAGTATTGT CCGCGTCGAC
GTGCAAAACT ACGGCAGCGA CTTCGGTACG GTCAGTATCA CCACGCCGAT CGACAGCAAC
AAGAAGTTCG TCGACAACAT GCAGTACAAC ATCGGCAAGG CCGGCGACAT CATCGTGGTT
CGCGCCTTCT ATCAATGGCC ATTGTTCGTC ACCGGGCTCG GCTTCGACAC CTCGAATCTC
GCCGGTGGTA AGCGACTGCT GTCGGCAACC GCCGCGTTCC GCAACGAGCC TTGA
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| Protein sequence | MPSIVSPARA MARKFRRNRK GSAAVEFAIV APIFFALLFA IIEVAMIFFA SQVLETAVQD
SSRLIFTRQA QDASMTQDQF KTEVCKRLIS LFDCSIVRVD VQNYGSDFGT VSITTPIDSN
KKFVDNMQYN IGKAGDIIVV RAFYQWPLFV TGLGFDTSNL AGGKRLLSAT AAFRNEP
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