Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4165 |
Symbol | |
ID | 6411849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4464172 |
End bp | 4466322 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714047 |
Product | glycogen branching enzyme |
Protein accession | YP_001993136 |
Protein GI | 192292531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTGC AATTGAGCGA CGAAGCCTAC GCAGTTGTCG AAGGCCGTCA TGCCGATCCA TTCCGCTATC TCGGCGCACA CCCTGAGGAT GGCGCCACCA TGGTGCGCGT GCTGCTGCCG GATGCCGTTG CGGTCGAGGT GATCGGCGAC AATGGCCACG TCGCGCCGCT CGACCAGGCG CATCCGGCCG GCCTGTTCGT CGGACCTCTG CCCGGCGCTT CGCCGCGCTA CACGTTGCGC GCACGGTTCG GCGACACCAC GGTCGAGCTG CAGGACCCCT ACCGCTTCCC GCCGATCCTC AGCGATTTCG ATCTTTACCT GCTCGGCGAA GGCTCCGACC AGCGGCTTTA CGACAAGCTT GGCGCCCATC CGATGGAGCT GGAAGGTGTC GCCGGCGTCG GTTTCGTGGT GCTGGCGCCG AACGCGCGCC GCGTCAGCGT GGTCGGCGAT TTCAATTTTT GGAATCCGCT GCGCCACCAG ATGCGGGTGC GCGGCAACGG CTATTGGGAG CTGTTTGTCC CGGGCGCCCG AGCCGGCGAT CACTACAAGT TCGATCTCGC CGGACCGAAC GGCGAACAAC TGCCGCAGAA GGCCGACCCG TTGGCATTCG CCGCCGAGCT GCGGCCGAAG ACCGCCTCGA TCGTGGTCGA CGCCACCACA CTGTCGCGAC CGCGGCCGGC GCCGGAGAAC ATCAACGCGC TGTCGGCGCC GATGTCGATC TACGAGGTGC ATCTCGGCTC GTGGCGCCGC AAGGAAGGCG ACCAGTGGCT GACCTATCGC GAACTCGCCG AGCAACTGCC GGCCTATGTC CGCGACATGG GCTTTACCCA CGTCGAATTC CTGCCGGTCA GCGAGCATCC GTTCGACGGC TCGTGGGGCT ATCAGCCGAC CGGCCTGTAC GCGCCGACCT CACGCTTCGG CTCGCCTGAG GATTTCTGCG CGCTGGTCGA CGCCTGCCAT GCCGCGGGCA TCGGCGTGAT CCTCGACTGG GTGCCGGGCC ATTTCCCGGA CGATCCGCAC GGCCTCGGCA ATTTCGACGG CACAGCGCTG TACGAGCACG CCAACCCGAT GCAAGGGCGG CATCTCGACT GGGGCACGCT GATCTACAAT TACGGGCGAA CCGAGGTCGT CAATTTCCTC ACCGCGAACG CGCTGTTCTG GCTGGAGCGT TACGGCATCG ACGGGCTGCG CGTCGATGCG GTGGCCTCGA TGCTGTACCT CGATTACAGC CGCCCGGCCG GCGGCTGGAT CCCGAACAAA TTCGGCGGCC GTGAGAACAT CGAGGCGATC GACTTCATTC GCCGCTTCAA CACTGAAGTG TACGGCAAAT TCCCGCACGC CACCACCGCA GCGGAGGAAT CCACCGCCTG GCCGCAGGTG TCGCGCCCGA TCGAATTCGG CGGGCTCGGA TTCGGCTACA AGTGGAACAT GGGGTGGATG CACGATACGC TGAACTACAT CAGCAAGGAT CCGATTCACC GCAAATATCA TCACGGCCAG ATCCTGTTCG GACTGCACTA CGCGTTCTCG GAGAATTTCA TTCTGCCGCT GTCGCACGAC GAGGTCGTTC ACGGCAAACG CTCGATCCTC GGCCGGATGC CGGGCGATGA GTGGCAACGC TTTGCGAATC TACGCGCCTA CTATGCGTTC ATGTTCGGGC ACCCCGGCAA GAAGCTGCTG TTCATGGGCA GCGAGTTCGG CCAGGAGCGC GAATGGAGCC ACGATCGCTC GCTCGACTGG CATCTGCTGG AATATCCGAA ATATTCCGGC ATCCAGGCGT TGCTGCGCGA CCTCAACAAG CTGTACAGGT CGCTGCCGGC GCTGCATCAG CTGGATTGCG ATCCGTTCGG CTTCGAATGG CTGATCACCG AAGACGCCAA TCGCAACGTG TTCGCCTGGA TGCGCAAGGG CAACGATACC CGCGCCCGCT GTCTGGTGAT CGTCAACTTC TCACCGAACG TCTACCAGGA CTATCGCGTC CGCGTGCCGT TCCCCGGTCG CTGGCGCGAA GTGTTCAATT CGGACTCGGC CGGCTACGGC GGCAGCAATG TCGGCAATGG CGGCGAAGTC CGCACCCTGG AGGGTCTGGT GCCTGAGCTG AGCCTGACGA TCCCGCCGCT GGCCGCGATC TTCCTGACGC CGGAGGATTG A
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Protein sequence | MTVQLSDEAY AVVEGRHADP FRYLGAHPED GATMVRVLLP DAVAVEVIGD NGHVAPLDQA HPAGLFVGPL PGASPRYTLR ARFGDTTVEL QDPYRFPPIL SDFDLYLLGE GSDQRLYDKL GAHPMELEGV AGVGFVVLAP NARRVSVVGD FNFWNPLRHQ MRVRGNGYWE LFVPGARAGD HYKFDLAGPN GEQLPQKADP LAFAAELRPK TASIVVDATT LSRPRPAPEN INALSAPMSI YEVHLGSWRR KEGDQWLTYR ELAEQLPAYV RDMGFTHVEF LPVSEHPFDG SWGYQPTGLY APTSRFGSPE DFCALVDACH AAGIGVILDW VPGHFPDDPH GLGNFDGTAL YEHANPMQGR HLDWGTLIYN YGRTEVVNFL TANALFWLER YGIDGLRVDA VASMLYLDYS RPAGGWIPNK FGGRENIEAI DFIRRFNTEV YGKFPHATTA AEESTAWPQV SRPIEFGGLG FGYKWNMGWM HDTLNYISKD PIHRKYHHGQ ILFGLHYAFS ENFILPLSHD EVVHGKRSIL GRMPGDEWQR FANLRAYYAF MFGHPGKKLL FMGSEFGQER EWSHDRSLDW HLLEYPKYSG IQALLRDLNK LYRSLPALHQ LDCDPFGFEW LITEDANRNV FAWMRKGNDT RARCLVIVNF SPNVYQDYRV RVPFPGRWRE VFNSDSAGYG GSNVGNGGEV RTLEGLVPEL SLTIPPLAAI FLTPED
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