| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4162 |
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| Symbol | |
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| ID | 6411846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4456746 |
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| End bp | 4458698 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714044 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_001993133 |
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| Protein GI | 192292528 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.245713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAT TCACCAAAGC TGCCGAGTTG GGCATCCAGA CCGAATTTTA TGACGGTCAG
GGGTGTCGCC ATGTCACGCC GCCGGAAGCG TTGGCGCTGA TTATCGAGGC CATGCCCGAA
GCTGCGGTGC GGCCGTTGCT GGACCGGATC GTGGTGATCC GGCAGGGCGA GGAATGCCGC
TCCGATCTGG ACGCGCAGGC GGCGTTGCCG GTGCGCTGGC AGATCGTTGC TGGTGAAGCG
ACGCTGGCGG AAGGCACCGC TGACGCGCGC AACGTCACCT GGCCGCAGGG GCTGCCGAGC
GGTACTCACC GGTTGCGGCT CAGCGACGCA TCCGGGCGCA CCGAGGAGGT GCCGCTTTTG
GTCGCGCCGC CGCATGCCTT CAACGGCGAG TTCGACCGCT CCTGGCTGAT CGCCGTGCAG
CTGTACAGCC TGCGCTCCGC GCGCAACTGG GGCATCGGCG ACTTCACCGA TCTGTCGCAG
TTGATCGAGC TGGCGGCCGC GCTCGGCGCC GGCGGCGTCG GCCTCAATCC GCTGCACGCG
CTGTTCGACG ACCGCCCCAA TGATTGCAGC CCGTATTCGC CGAACAGCCG GATGTTTCTC
AATCCGCTTT ACATCGATGT CGAGCGATTG CCGGAATTCT CGCTGAGCGA CCTGCCGGGT
GTCGATATCG CGGCGCTGCG CGACGGCGAA CTGATCGACT ACAACGTGGT GGCGACGATG
AAGTGGCGTG CCTTGCGCGC CGCTTTCGAC AAATTCTGCG ACGCGCCTGG GCCGGGACGG
CGCGAGGCGT TCGAGGCGTT CCGCTCCGAG CGCGCGCCGC TGCTGACGCG ATTCGCGTGT
TTCGAAGTGC TCCGGCACAA ATTCGGGACG CCGTGGTGGG ACTGGACCGA CGAGTGGCGG
CGGCCCGACG ACGTGCGCTG CGCCCGCCTG CGCGAGGGGC CGGACGGCCG CGCGGTCGAG
TTCATCGAAT TTGCGCAATG GTGCGCCGAT GAACAATTGC GCGCGTGCCA GGCTCTCGCC
GCCGAACGCG GCATGCGCGT CGGGCTGTAT CTCGACGTCG CGGTGGGAGT GCAGAGCGAC
GGCTTCGACG CCTGGAACGA ACAGACGGCG ATCTCGCGCG TGCTGTCGGT CGGCGCGCCG
CCGGATTCGC TCAACACCGC TGGTCAGAAT TGGGGACTTG CCGGGTTCAA CGCGCCGGGG
CTGGAGCTGA CCGGGTTCGC GCCGTTCCGC GAGATGCTGC GCGCATCGAT GCGCTATGCC
GGTGCGATCC GGCTCGATCA CGTGCTCGGG CTCAACCGGC TGTATCTGGT CCCGCACGGT
TTCGCCGCCA ATCAGGGCGT CTATGTGCGA ATGCCGTTCG AGGCGCTGCT CGCGGTCACC
GCGCAGGAGA GCGTCGATCA GCGCTGCGTG GTGATCGGCG AGGATCTCGG CACGGTGCCC
GACGGCTTCC GCGAACAGCT CGCGGCCTGG GGCGTCTGGT CGTATCGCGT GATGATGTTC
GAGCGCGACT TTCACCAGGG CTGGTTCTTC GGCCTCGATC ATTATCTGCC GAACGCGCTG
GTCACCTTCA ACACCCATGA CCTCGCGACC TATTCGGGCT GGCGTGCGTC GACCGATCTG
CATCTGAAGC GGTCGATCGG CGTCGATCCC GGCGAGAGCG ACGATTCCCG CCGCCACGCT
TTGGTGATGC TCGGCGATGC GCTGCGCCAT CAGGGCATCG AGCAGGACGA CATCTACGCG
GTGCTGACGT TCCTGGCGCG CACGCCGTCG CGGCTGCTGG CGATCGCGCT GGAAGATCTG
CTGGGCGTGC TCGATCAACC CAACGTGCCC GGCACGGTGT CGGAACATCC GAACTGGCGG
CGCAGGCTGC CGAAGGCGAT CGAAGACATC GCCGCGGTGA TCAATCGCCA AGCGCTGCTC
GCGGCGACCG CCGACCGCCG CATCGCGGGG TGA
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| Protein sequence | MDLFTKAAEL GIQTEFYDGQ GCRHVTPPEA LALIIEAMPE AAVRPLLDRI VVIRQGEECR
SDLDAQAALP VRWQIVAGEA TLAEGTADAR NVTWPQGLPS GTHRLRLSDA SGRTEEVPLL
VAPPHAFNGE FDRSWLIAVQ LYSLRSARNW GIGDFTDLSQ LIELAAALGA GGVGLNPLHA
LFDDRPNDCS PYSPNSRMFL NPLYIDVERL PEFSLSDLPG VDIAALRDGE LIDYNVVATM
KWRALRAAFD KFCDAPGPGR REAFEAFRSE RAPLLTRFAC FEVLRHKFGT PWWDWTDEWR
RPDDVRCARL REGPDGRAVE FIEFAQWCAD EQLRACQALA AERGMRVGLY LDVAVGVQSD
GFDAWNEQTA ISRVLSVGAP PDSLNTAGQN WGLAGFNAPG LELTGFAPFR EMLRASMRYA
GAIRLDHVLG LNRLYLVPHG FAANQGVYVR MPFEALLAVT AQESVDQRCV VIGEDLGTVP
DGFREQLAAW GVWSYRVMMF ERDFHQGWFF GLDHYLPNAL VTFNTHDLAT YSGWRASTDL
HLKRSIGVDP GESDDSRRHA LVMLGDALRH QGIEQDDIYA VLTFLARTPS RLLAIALEDL
LGVLDQPNVP GTVSEHPNWR RRLPKAIEDI AAVINRQALL AATADRRIAG
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