Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4152 |
Symbol | |
ID | 6411836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4444866 |
End bp | 4445639 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714034 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001993123 |
Protein GI | 192292518 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGA GCGGCAAGAC GGCATTGATC ACCGGCGGCA ACAGCGGCAT CGGTCTTGCG ACCGCCAAGC TGTTCGTGAC CGAAGGCGCA CGCGTGACGA TCACCGGCCG TGATCGGGCG AGACTGGATG CGGCCGCGCG CGAGCTCGGC GCGCAGGCGC TCGCGGTCGA GGCCGATGTC ACCGACATCG CAGCGATCGA GAACGCGGTC GCCCGTGCGG CGGAGCGGTT CGGCAAGCTC GACATCGTGT TCGCCAATGC GGGCATCCCC GGCGCGACGC CGCTCGGCGG CACTTCGCTG GCGGCGTTCG AACAGGTGAT CCGCACCAAT CTGACGGCGG TGTTCTTCAC CGTGCAGGCT GCGTTGCCGT ATCTGAACGA CGGCGCCTCG ATCATTCTCA ACGGTTCGGT GATCTCGGTG CTCGGCAATC CGGGCTTTGC GGCCTACGCG GCGAGCAAGG CCGGGCTGCG CGGAATGGCG CGGGTGATGG CTTCCGAACT GTCGCCGCGC AACATCCGCG TCAATGTGGT GGCGCCGGGC GGGGCACGGA CACCGATCTG GAAGGACACC GCGCCGACCG ATCAGGCGAT GGCCGTGCTC GAAAAGCGGA TCGCGGCGGC GACGCCGCTC GGCCGGATCG CCGAGCCGGA GCACATCGCC AAGACCGTGC TGTTTCTCGC CTCCGACGAT GCCGCCCACA TCCAGAGCGC CGAAATCTTC GTCGATGGCG GCGCCACCGG ATCGCCCGCG GGTGTGCCGG CGTTTCGCAG CTGA
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Protein sequence | MRLSGKTALI TGGNSGIGLA TAKLFVTEGA RVTITGRDRA RLDAAARELG AQALAVEADV TDIAAIENAV ARAAERFGKL DIVFANAGIP GATPLGGTSL AAFEQVIRTN LTAVFFTVQA ALPYLNDGAS IILNGSVISV LGNPGFAAYA ASKAGLRGMA RVMASELSPR NIRVNVVAPG GARTPIWKDT APTDQAMAVL EKRIAAATPL GRIAEPEHIA KTVLFLASDD AAHIQSAEIF VDGGATGSPA GVPAFRS
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